Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRFN1Q9P244 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.59■■□□□ 1.05
LRFN1Q9P244 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRFN1Q9P244 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRFN1Q9P244 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRFN1Q9P244 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN1Q9P244 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN1Q9P244 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN1Q9P244 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN1Q9P244 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.58■■□□□ 1.05
LRFN1Q9P244 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN1Q9P244 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.58■■□□□ 1.05
LRFN1Q9P244 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
LRFN1Q9P244 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRFN1Q9P244 KRT16P3-201ENST00000439127 1283 ntBASIC21.58■■□□□ 1.05
LRFN1Q9P244 AC092028.1-203ENST00000608262 953 ntBASIC21.58■■□□□ 1.05
LRFN1Q9P244 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.58■■□□□ 1.05
LRFN1Q9P244 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LRFN1Q9P244 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.57■■□□□ 1.04
LRFN1Q9P244 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN1Q9P244 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.57■■□□□ 1.04
LRFN1Q9P244 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRFN1Q9P244 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.57■■□□□ 1.04
LRFN1Q9P244 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.57■■□□□ 1.04
LRFN1Q9P244 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.57■■□□□ 1.04
LRFN1Q9P244 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LRFN1Q9P244 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN1Q9P244 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
LRFN1Q9P244 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN1Q9P244 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.56■■□□□ 1.04
LRFN1Q9P244 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.56■■□□□ 1.04
LRFN1Q9P244 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN1Q9P244 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRFN1Q9P244 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.56■■□□□ 1.04
LRFN1Q9P244 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.55■■□□□ 1.04
LRFN1Q9P244 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN1Q9P244 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN1Q9P244 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.55■■□□□ 1.04
LRFN1Q9P244 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.55■■□□□ 1.04
LRFN1Q9P244 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN1Q9P244 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRFN1Q9P244 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN1Q9P244 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN1Q9P244 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.54■■□□□ 1.04
LRFN1Q9P244 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LRFN1Q9P244 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.54■■□□□ 1.04
LRFN1Q9P244 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN1Q9P244 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRFN1Q9P244 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.54■■□□□ 1.04
LRFN1Q9P244 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.54■■□□□ 1.04
LRFN1Q9P244 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LRFN1Q9P244 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.53■■□□□ 1.04
LRFN1Q9P244 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN1Q9P244 AC090877.2-201ENST00000558441 1738 ntBASIC21.53■■□□□ 1.04
LRFN1Q9P244 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN1Q9P244 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
LRFN1Q9P244 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRFN1Q9P244 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LRFN1Q9P244 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.52■■□□□ 1.04
LRFN1Q9P244 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LRFN1Q9P244 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
LRFN1Q9P244 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRFN1Q9P244 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN1Q9P244 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LRFN1Q9P244 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.51■■□□□ 1.03
LRFN1Q9P244 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LRFN1Q9P244 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN1Q9P244 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRFN1Q9P244 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN1Q9P244 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN1Q9P244 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.5■■□□□ 1.03
LRFN1Q9P244 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN1Q9P244 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.5■■□□□ 1.03
LRFN1Q9P244 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.5■■□□□ 1.03
LRFN1Q9P244 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.5■■□□□ 1.03
LRFN1Q9P244 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.5■■□□□ 1.03
LRFN1Q9P244 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.5■■□□□ 1.03
LRFN1Q9P244 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LRFN1Q9P244 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRFN1Q9P244 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.49■■□□□ 1.03
LRFN1Q9P244 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.49■■□□□ 1.03
LRFN1Q9P244 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN1Q9P244 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.49■■□□□ 1.03
LRFN1Q9P244 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN1Q9P244 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN1Q9P244 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN1Q9P244 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN1Q9P244 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRFN1Q9P244 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN1Q9P244 AF131216.4-201ENST00000638924 1588 ntBASIC21.48■■□□□ 1.03
LRFN1Q9P244 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.48■■□□□ 1.03
LRFN1Q9P244 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN1Q9P244 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.48■■□□□ 1.03
LRFN1Q9P244 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.48■■□□□ 1.03
LRFN1Q9P244 MTDHP2-201ENST00000601468 714 ntBASIC21.48■■□□□ 1.03
LRFN1Q9P244 AC010997.5-201ENST00000609182 354 ntBASIC21.48■■□□□ 1.03
LRFN1Q9P244 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN1Q9P244 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN1Q9P244 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRFN1Q9P244 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms