Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSL2Q9HCI7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
MSL2Q9HCI7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
MSL2Q9HCI7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSL2Q9HCI7 AC022616.5-201ENST00000518796 181 ntBASIC20.1■□□□□ 0.81
MSL2Q9HCI7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSL2Q9HCI7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSL2Q9HCI7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.1■□□□□ 0.81
MSL2Q9HCI7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MSL2Q9HCI7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSL2Q9HCI7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.08■□□□□ 0.81
MSL2Q9HCI7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSL2Q9HCI7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MSL2Q9HCI7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.08■□□□□ 0.8
MSL2Q9HCI7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSL2Q9HCI7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 AC103724.3-201ENST00000564481 992 ntBASIC20.07■□□□□ 0.8
MSL2Q9HCI7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSL2Q9HCI7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 AC022211.4-201ENST00000625094 2161 ntBASIC20.06■□□□□ 0.8
MSL2Q9HCI7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSL2Q9HCI7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSL2Q9HCI7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSL2Q9HCI7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MSL2Q9HCI7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MSL2Q9HCI7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MSL2Q9HCI7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MSL2Q9HCI7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSL2Q9HCI7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
MSL2Q9HCI7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.04■□□□□ 0.8
MSL2Q9HCI7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSL2Q9HCI7 AC120024.1-201ENST00000562672 995 ntBASIC20.03■□□□□ 0.8
MSL2Q9HCI7 AL031848.2-201ENST00000607670 837 ntBASIC20.03■□□□□ 0.8
MSL2Q9HCI7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
MSL2Q9HCI7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
MSL2Q9HCI7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSL2Q9HCI7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSL2Q9HCI7 THA1P-201ENST00000590384 1145 ntBASIC20.02■□□□□ 0.8
MSL2Q9HCI7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
MSL2Q9HCI7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSL2Q9HCI7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MSL2Q9HCI7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MSL2Q9HCI7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSL2Q9HCI7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSL2Q9HCI7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSL2Q9HCI7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MSL2Q9HCI7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSL2Q9HCI7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSL2Q9HCI7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.01■□□□□ 0.79
MSL2Q9HCI7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MSL2Q9HCI7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms