Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.4■■□□□ 1.66
RC3H2Q9HBD1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RC3H2Q9HBD1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.4■■□□□ 1.66
RC3H2Q9HBD1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RC3H2Q9HBD1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
RC3H2Q9HBD1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.39■■□□□ 1.66
RC3H2Q9HBD1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RC3H2Q9HBD1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RC3H2Q9HBD1 AC106739.1-201ENST00000617035 715 ntBASIC25.38■■□□□ 1.65
RC3H2Q9HBD1 AC142086.6-201ENST00000621154 1765 ntBASIC25.38■■□□□ 1.65
RC3H2Q9HBD1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RC3H2Q9HBD1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.37■■□□□ 1.65
RC3H2Q9HBD1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RC3H2Q9HBD1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
RC3H2Q9HBD1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RC3H2Q9HBD1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.37■■□□□ 1.65
RC3H2Q9HBD1 MIR6722-201ENST00000617286 78 ntBASIC25.37■■□□□ 1.65
RC3H2Q9HBD1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
RC3H2Q9HBD1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RC3H2Q9HBD1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.36■■□□□ 1.65
RC3H2Q9HBD1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.36■■□□□ 1.65
RC3H2Q9HBD1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.36■■□□□ 1.65
RC3H2Q9HBD1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.36■■□□□ 1.65
RC3H2Q9HBD1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RC3H2Q9HBD1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RC3H2Q9HBD1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RC3H2Q9HBD1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.35■■□□□ 1.65
RC3H2Q9HBD1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RC3H2Q9HBD1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RC3H2Q9HBD1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RC3H2Q9HBD1 ZNRF2P3-201ENST00000424200 374 ntBASIC25.34■■□□□ 1.65
RC3H2Q9HBD1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.34■■□□□ 1.65
RC3H2Q9HBD1 AL031432.3-201ENST00000607698 485 ntBASIC25.34■■□□□ 1.65
RC3H2Q9HBD1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RC3H2Q9HBD1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RC3H2Q9HBD1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RC3H2Q9HBD1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RC3H2Q9HBD1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.33■■□□□ 1.65
RC3H2Q9HBD1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RC3H2Q9HBD1 AC090877.2-201ENST00000558441 1738 ntBASIC25.33■■□□□ 1.65
RC3H2Q9HBD1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RC3H2Q9HBD1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RC3H2Q9HBD1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.33■■□□□ 1.64
RC3H2Q9HBD1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H2Q9HBD1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.32■■□□□ 1.64
RC3H2Q9HBD1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.32■■□□□ 1.64
RC3H2Q9HBD1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.32■■□□□ 1.64
RC3H2Q9HBD1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H2Q9HBD1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
RC3H2Q9HBD1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
RC3H2Q9HBD1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RC3H2Q9HBD1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
RC3H2Q9HBD1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RC3H2Q9HBD1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.31■■□□□ 1.64
RC3H2Q9HBD1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RC3H2Q9HBD1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H2Q9HBD1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H2Q9HBD1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.3■■□□□ 1.64
RC3H2Q9HBD1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H2Q9HBD1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
RC3H2Q9HBD1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
RC3H2Q9HBD1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.3■■□□□ 1.64
RC3H2Q9HBD1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.3■■□□□ 1.64
RC3H2Q9HBD1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.29■■□□□ 1.64
RC3H2Q9HBD1 PBX2P1-201ENST00000493219 1291 ntBASIC25.29■■□□□ 1.64
RC3H2Q9HBD1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.29■■□□□ 1.64
RC3H2Q9HBD1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RC3H2Q9HBD1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H2Q9HBD1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
RC3H2Q9HBD1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.28■■□□□ 1.64
RC3H2Q9HBD1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H2Q9HBD1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.27■■□□□ 1.64
RC3H2Q9HBD1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RC3H2Q9HBD1 SUDS3P1-201ENST00000505831 966 ntBASIC25.27■■□□□ 1.64
RC3H2Q9HBD1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.27■■□□□ 1.64
RC3H2Q9HBD1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.27■■□□□ 1.64
RC3H2Q9HBD1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RC3H2Q9HBD1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 UNC93B3-201ENST00000308076 687 ntBASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 RARRES2P6-201ENST00000567333 442 ntBASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RC3H2Q9HBD1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.25■■□□□ 1.63
RC3H2Q9HBD1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RC3H2Q9HBD1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
RC3H2Q9HBD1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RC3H2Q9HBD1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
RC3H2Q9HBD1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
RC3H2Q9HBD1 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.23■■□□□ 1.63
RC3H2Q9HBD1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.23■■□□□ 1.63
RC3H2Q9HBD1 AC142381.2-201ENST00000566120 298 ntBASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms