Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.51■■■□□ 2
SH2D4AQ9H788 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.51■■■□□ 2
SH2D4AQ9H788 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.51■■□□□ 1.99
SH2D4AQ9H788 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.51■■□□□ 1.99
SH2D4AQ9H788 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.51■■□□□ 1.99
SH2D4AQ9H788 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.51■■□□□ 1.99
SH2D4AQ9H788 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
SH2D4AQ9H788 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.51■■□□□ 1.99
SH2D4AQ9H788 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH2D4AQ9H788 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH2D4AQ9H788 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.5■■□□□ 1.99
SH2D4AQ9H788 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH2D4AQ9H788 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SH2D4AQ9H788 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.5■■□□□ 1.99
SH2D4AQ9H788 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH2D4AQ9H788 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.49■■□□□ 1.99
SH2D4AQ9H788 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SH2D4AQ9H788 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SH2D4AQ9H788 MTDHP2-201ENST00000601468 714 ntBASIC27.49■■□□□ 1.99
SH2D4AQ9H788 AC010997.5-201ENST00000609182 354 ntBASIC27.49■■□□□ 1.99
SH2D4AQ9H788 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.49■■□□□ 1.99
SH2D4AQ9H788 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SH2D4AQ9H788 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.49■■□□□ 1.99
SH2D4AQ9H788 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.49■■□□□ 1.99
SH2D4AQ9H788 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SH2D4AQ9H788 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.48■■□□□ 1.99
SH2D4AQ9H788 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.48■■□□□ 1.99
SH2D4AQ9H788 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
SH2D4AQ9H788 AC090877.2-201ENST00000558441 1738 ntBASIC27.47■■□□□ 1.99
SH2D4AQ9H788 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.47■■□□□ 1.99
SH2D4AQ9H788 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SH2D4AQ9H788 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.47■■□□□ 1.99
SH2D4AQ9H788 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SH2D4AQ9H788 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.47■■□□□ 1.99
SH2D4AQ9H788 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.46■■□□□ 1.99
SH2D4AQ9H788 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SH2D4AQ9H788 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SH2D4AQ9H788 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.46■■□□□ 1.99
SH2D4AQ9H788 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SH2D4AQ9H788 AF131216.4-201ENST00000638924 1588 ntBASIC27.45■■□□□ 1.99
SH2D4AQ9H788 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SH2D4AQ9H788 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SH2D4AQ9H788 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
SH2D4AQ9H788 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.44■■□□□ 1.98
SH2D4AQ9H788 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.43■■□□□ 1.98
SH2D4AQ9H788 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SH2D4AQ9H788 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.43■■□□□ 1.98
SH2D4AQ9H788 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.43■■□□□ 1.98
SH2D4AQ9H788 MIR6724-1-201ENST00000616420 92 ntBASIC27.43■■□□□ 1.98
SH2D4AQ9H788 MIR6724-2-201ENST00000616483 92 ntBASIC27.43■■□□□ 1.98
SH2D4AQ9H788 MIR6724-4-201ENST00000617390 92 ntBASIC27.43■■□□□ 1.98
SH2D4AQ9H788 MIR6724-3-201ENST00000622482 92 ntBASIC27.43■■□□□ 1.98
SH2D4AQ9H788 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
SH2D4AQ9H788 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SH2D4AQ9H788 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SH2D4AQ9H788 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
SH2D4AQ9H788 AC092803.2-201ENST00000564287 1899 ntBASIC27.42■■□□□ 1.98
SH2D4AQ9H788 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.42■■□□□ 1.98
SH2D4AQ9H788 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SH2D4AQ9H788 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.42■■□□□ 1.98
SH2D4AQ9H788 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
SH2D4AQ9H788 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
SH2D4AQ9H788 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SH2D4AQ9H788 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SH2D4AQ9H788 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.42■■□□□ 1.98
SH2D4AQ9H788 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SH2D4AQ9H788 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SH2D4AQ9H788 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.41■■□□□ 1.98
SH2D4AQ9H788 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.41■■□□□ 1.98
SH2D4AQ9H788 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
SH2D4AQ9H788 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SH2D4AQ9H788 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SH2D4AQ9H788 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.39■■□□□ 1.98
SH2D4AQ9H788 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.39■■□□□ 1.98
SH2D4AQ9H788 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
SH2D4AQ9H788 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.38■■□□□ 1.97
SH2D4AQ9H788 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
SH2D4AQ9H788 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SH2D4AQ9H788 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SH2D4AQ9H788 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.37■■□□□ 1.97
SH2D4AQ9H788 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SH2D4AQ9H788 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
SH2D4AQ9H788 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
SH2D4AQ9H788 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms