Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 THRA-202ENST00000394121 2260 ntTSL 2 BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC13.83□□□□□ -0.19
LIMD2Q9BT23 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 GPX1-201ENST00000419349 1106 ntBASIC13.83□□□□□ -0.2
LIMD2Q9BT23 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LIMD2Q9BT23 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 ERN1-208ENST00000606895 2068 ntBASIC13.82□□□□□ -0.2
LIMD2Q9BT23 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC13.82□□□□□ -0.2
LIMD2Q9BT23 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 AC007029.1-201ENST00000604183 313 ntBASIC13.81□□□□□ -0.2
LIMD2Q9BT23 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIMD2Q9BT23 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 HES4-204ENST00000484667 667 ntTSL 3 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 GFER-205ENST00000569451 517 ntTSL 5 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 AC020928.2-201ENST00000588717 2197 ntBASIC13.8□□□□□ -0.2
LIMD2Q9BT23 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
LIMD2Q9BT23 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 AC093536.1-201ENST00000569153 554 ntBASIC13.79□□□□□ -0.2
LIMD2Q9BT23 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LIMD2Q9BT23 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC13.78□□□□□ -0.2
LIMD2Q9BT23 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms