Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GFI1Q99684 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.32■□□□□ 0.84
GFI1Q99684 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GFI1Q99684 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GFI1Q99684 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GFI1Q99684 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GFI1Q99684 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GFI1Q99684 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GFI1Q99684 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GFI1Q99684 AC126177.7-201ENST00000547904 679 ntBASIC20.31■□□□□ 0.84
GFI1Q99684 HLA-L-211ENST00000482052 1765 ntBASIC20.31■□□□□ 0.84
GFI1Q99684 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GFI1Q99684 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GFI1Q99684 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GFI1Q99684 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GFI1Q99684 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.29■□□□□ 0.84
GFI1Q99684 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.29■□□□□ 0.84
GFI1Q99684 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
GFI1Q99684 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.29■□□□□ 0.84
GFI1Q99684 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
GFI1Q99684 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.29■□□□□ 0.84
GFI1Q99684 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GFI1Q99684 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GFI1Q99684 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.29■□□□□ 0.84
GFI1Q99684 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GFI1Q99684 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.28■□□□□ 0.84
GFI1Q99684 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GFI1Q99684 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFI1Q99684 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
GFI1Q99684 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFI1Q99684 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFI1Q99684 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
GFI1Q99684 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.28■□□□□ 0.84
GFI1Q99684 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFI1Q99684 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.28■□□□□ 0.84
GFI1Q99684 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFI1Q99684 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GFI1Q99684 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.28■□□□□ 0.84
GFI1Q99684 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GFI1Q99684 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
GFI1Q99684 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GFI1Q99684 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GFI1Q99684 AL157400.5-201ENST00000507624 621 ntBASIC20.27■□□□□ 0.84
GFI1Q99684 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GFI1Q99684 CR559946.2-201ENST00000623684 991 ntBASIC20.27■□□□□ 0.84
GFI1Q99684 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.27■□□□□ 0.84
GFI1Q99684 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GFI1Q99684 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GFI1Q99684 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GFI1Q99684 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GFI1Q99684 RPS2P35-201ENST00000443417 897 ntBASIC20.26■□□□□ 0.83
GFI1Q99684 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
GFI1Q99684 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GFI1Q99684 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GFI1Q99684 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
GFI1Q99684 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.26■□□□□ 0.83
GFI1Q99684 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GFI1Q99684 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
GFI1Q99684 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.25■□□□□ 0.83
GFI1Q99684 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GFI1Q99684 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GFI1Q99684 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
GFI1Q99684 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GFI1Q99684 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.25■□□□□ 0.83
GFI1Q99684 AC025884.2-201ENST00000553429 711 ntBASIC20.25■□□□□ 0.83
GFI1Q99684 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.25■□□□□ 0.83
GFI1Q99684 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
GFI1Q99684 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GFI1Q99684 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GFI1Q99684 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
GFI1Q99684 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GFI1Q99684 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GFI1Q99684 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFI1Q99684 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
GFI1Q99684 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFI1Q99684 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.24■□□□□ 0.83
GFI1Q99684 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFI1Q99684 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GFI1Q99684 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GFI1Q99684 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GFI1Q99684 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.24■□□□□ 0.83
GFI1Q99684 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GFI1Q99684 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GFI1Q99684 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GFI1Q99684 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
GFI1Q99684 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.23■□□□□ 0.83
GFI1Q99684 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GFI1Q99684 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.23■□□□□ 0.83
GFI1Q99684 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms