Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.84■■■□□ 2.05
NEK1Q96PY6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NEK1Q96PY6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NEK1Q96PY6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.83■■■□□ 2.05
NEK1Q96PY6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NEK1Q96PY6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NEK1Q96PY6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NEK1Q96PY6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NEK1Q96PY6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.83■■■□□ 2.05
NEK1Q96PY6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.83■■■□□ 2.05
NEK1Q96PY6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
NEK1Q96PY6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NEK1Q96PY6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NEK1Q96PY6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.82■■■□□ 2.04
NEK1Q96PY6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
NEK1Q96PY6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.82■■■□□ 2.04
NEK1Q96PY6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.82■■■□□ 2.04
NEK1Q96PY6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NEK1Q96PY6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
NEK1Q96PY6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
NEK1Q96PY6 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.81■■■□□ 2.04
NEK1Q96PY6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NEK1Q96PY6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NEK1Q96PY6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
NEK1Q96PY6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NEK1Q96PY6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
NEK1Q96PY6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.8■■■□□ 2.04
NEK1Q96PY6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
NEK1Q96PY6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NEK1Q96PY6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.8■■■□□ 2.04
NEK1Q96PY6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NEK1Q96PY6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NEK1Q96PY6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NEK1Q96PY6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NEK1Q96PY6 AC093323.1-202ENST00000635031 2045 ntBASIC27.79■■■□□ 2.04
NEK1Q96PY6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
NEK1Q96PY6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
NEK1Q96PY6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.79■■■□□ 2.04
NEK1Q96PY6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NEK1Q96PY6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
NEK1Q96PY6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.79■■■□□ 2.04
NEK1Q96PY6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.79■■■□□ 2.04
NEK1Q96PY6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NEK1Q96PY6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NEK1Q96PY6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NEK1Q96PY6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
NEK1Q96PY6 TSPY13P-201ENST00000338964 914 ntBASIC27.78■■■□□ 2.04
NEK1Q96PY6 AL592295.1-201ENST00000400984 884 ntBASIC27.78■■■□□ 2.04
NEK1Q96PY6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
NEK1Q96PY6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NEK1Q96PY6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
NEK1Q96PY6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
NEK1Q96PY6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
NEK1Q96PY6 AC139795.1-202ENST00000500444 432 ntBASIC27.77■■■□□ 2.04
NEK1Q96PY6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
NEK1Q96PY6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
NEK1Q96PY6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.76■■■□□ 2.04
NEK1Q96PY6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NEK1Q96PY6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NEK1Q96PY6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
NEK1Q96PY6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
NEK1Q96PY6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.76■■■□□ 2.03
NEK1Q96PY6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
NEK1Q96PY6 AC012354.3-201ENST00000623734 483 ntBASIC27.76■■■□□ 2.03
NEK1Q96PY6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.76■■■□□ 2.03
NEK1Q96PY6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
NEK1Q96PY6 LINC01124-201ENST00000409786 2117 ntBASIC27.76■■■□□ 2.03
NEK1Q96PY6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
NEK1Q96PY6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.75■■■□□ 2.03
NEK1Q96PY6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
NEK1Q96PY6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
NEK1Q96PY6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NEK1Q96PY6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
NEK1Q96PY6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.74■■■□□ 2.03
NEK1Q96PY6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NEK1Q96PY6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NEK1Q96PY6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.74■■■□□ 2.03
NEK1Q96PY6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NEK1Q96PY6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.73■■■□□ 2.03
NEK1Q96PY6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
NEK1Q96PY6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
NEK1Q96PY6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
NEK1Q96PY6 AC019171.1-201ENST00000601251 1056 ntBASIC27.73■■■□□ 2.03
NEK1Q96PY6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
NEK1Q96PY6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
NEK1Q96PY6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
NEK1Q96PY6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.72■■■□□ 2.03
NEK1Q96PY6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
NEK1Q96PY6 BHLHE23-202ENST00000612929 1109 ntBASIC27.72■■■□□ 2.03
NEK1Q96PY6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
NEK1Q96PY6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
NEK1Q96PY6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
NEK1Q96PY6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
NEK1Q96PY6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
NEK1Q96PY6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.71■■■□□ 2.03
NEK1Q96PY6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
NEK1Q96PY6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
NEK1Q96PY6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
NEK1Q96PY6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.7■■■□□ 2.03
NEK1Q96PY6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms