Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
COL21A1Q96P44 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL21A1Q96P44 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL21A1Q96P44 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL21A1Q96P44 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL21A1Q96P44 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL21A1Q96P44 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.05■■□□□ 1.12
COL21A1Q96P44 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
COL21A1Q96P44 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL21A1Q96P44 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL21A1Q96P44 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
COL21A1Q96P44 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL21A1Q96P44 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL21A1Q96P44 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL21A1Q96P44 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.04■■□□□ 1.12
COL21A1Q96P44 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL21A1Q96P44 TSPY13P-201ENST00000338964 914 ntBASIC22.04■■□□□ 1.12
COL21A1Q96P44 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL21A1Q96P44 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.04■■□□□ 1.12
COL21A1Q96P44 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.04■■□□□ 1.12
COL21A1Q96P44 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.04■■□□□ 1.12
COL21A1Q96P44 DUX4L18-201ENST00000553347 1267 ntBASIC22.04■■□□□ 1.12
COL21A1Q96P44 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL21A1Q96P44 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL21A1Q96P44 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL21A1Q96P44 AP003733.4-201ENST00000623785 1697 ntBASIC22.04■■□□□ 1.12
COL21A1Q96P44 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL21A1Q96P44 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
COL21A1Q96P44 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL21A1Q96P44 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL21A1Q96P44 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL21A1Q96P44 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
COL21A1Q96P44 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
COL21A1Q96P44 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.03■■□□□ 1.12
COL21A1Q96P44 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL21A1Q96P44 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL21A1Q96P44 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL21A1Q96P44 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.03■■□□□ 1.12
COL21A1Q96P44 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.02■■□□□ 1.12
COL21A1Q96P44 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
COL21A1Q96P44 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL21A1Q96P44 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL21A1Q96P44 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL21A1Q96P44 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
COL21A1Q96P44 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL21A1Q96P44 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL21A1Q96P44 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL21A1Q96P44 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL21A1Q96P44 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL21A1Q96P44 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.01■■□□□ 1.11
COL21A1Q96P44 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL21A1Q96P44 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
COL21A1Q96P44 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL21A1Q96P44 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22■■□□□ 1.11
COL21A1Q96P44 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
COL21A1Q96P44 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL21A1Q96P44 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22■■□□□ 1.11
COL21A1Q96P44 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COL21A1Q96P44 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22■■□□□ 1.11
COL21A1Q96P44 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL21A1Q96P44 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL21A1Q96P44 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
COL21A1Q96P44 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL21A1Q96P44 AL033527.3-201ENST00000566366 1196 ntBASIC22■■□□□ 1.11
COL21A1Q96P44 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL21A1Q96P44 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
COL21A1Q96P44 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL21A1Q96P44 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL21A1Q96P44 RPS2P7-201ENST00000447334 885 ntBASIC21.99■■□□□ 1.11
COL21A1Q96P44 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.99■■□□□ 1.11
COL21A1Q96P44 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL21A1Q96P44 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL21A1Q96P44 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL21A1Q96P44 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.98■■□□□ 1.11
COL21A1Q96P44 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL21A1Q96P44 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL21A1Q96P44 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.98■■□□□ 1.11
COL21A1Q96P44 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL21A1Q96P44 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL21A1Q96P44 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.98■■□□□ 1.11
COL21A1Q96P44 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL21A1Q96P44 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL21A1Q96P44 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL21A1Q96P44 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.97■■□□□ 1.11
COL21A1Q96P44 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL21A1Q96P44 LINC01124-201ENST00000409786 2117 ntBASIC21.97■■□□□ 1.11
COL21A1Q96P44 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL21A1Q96P44 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL21A1Q96P44 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL21A1Q96P44 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.97■■□□□ 1.11
COL21A1Q96P44 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.97■■□□□ 1.11
COL21A1Q96P44 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.97■■□□□ 1.11
COL21A1Q96P44 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL21A1Q96P44 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
COL21A1Q96P44 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL21A1Q96P44 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL21A1Q96P44 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL21A1Q96P44 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL21A1Q96P44 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL21A1Q96P44 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms