Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF183Q96D59 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF183Q96D59 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF183Q96D59 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF183Q96D59 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF183Q96D59 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF183Q96D59 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RNF183Q96D59 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF183Q96D59 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF183Q96D59 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF183Q96D59 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF183Q96D59 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF183Q96D59 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF183Q96D59 AC239859.2-201ENST00000444165 318 ntBASIC17.24■□□□□ 0.35
RNF183Q96D59 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF183Q96D59 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF183Q96D59 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF183Q96D59 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF183Q96D59 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF183Q96D59 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
RNF183Q96D59 GUSBP5-201ENST00000418136 578 ntBASIC17.23■□□□□ 0.35
RNF183Q96D59 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF183Q96D59 AC120024.1-201ENST00000562672 995 ntBASIC17.23■□□□□ 0.35
RNF183Q96D59 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF183Q96D59 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF183Q96D59 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF183Q96D59 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
RNF183Q96D59 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF183Q96D59 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF183Q96D59 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF183Q96D59 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF183Q96D59 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF183Q96D59 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF183Q96D59 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF183Q96D59 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF183Q96D59 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF183Q96D59 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF183Q96D59 BX664725.1-201ENST00000438252 379 ntBASIC17.22■□□□□ 0.35
RNF183Q96D59 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RNF183Q96D59 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF183Q96D59 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF183Q96D59 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF183Q96D59 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF183Q96D59 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF183Q96D59 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF183Q96D59 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF183Q96D59 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF183Q96D59 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF183Q96D59 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF183Q96D59 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF183Q96D59 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF183Q96D59 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF183Q96D59 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF183Q96D59 KRT125P-201ENST00000546827 989 ntBASIC17.21■□□□□ 0.35
RNF183Q96D59 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF183Q96D59 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF183Q96D59 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.21■□□□□ 0.34
RNF183Q96D59 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF183Q96D59 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF183Q96D59 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF183Q96D59 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF183Q96D59 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF183Q96D59 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF183Q96D59 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF183Q96D59 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF183Q96D59 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF183Q96D59 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF183Q96D59 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF183Q96D59 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF183Q96D59 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF183Q96D59 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF183Q96D59 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF183Q96D59 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF183Q96D59 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF183Q96D59 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF183Q96D59 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF183Q96D59 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RNF183Q96D59 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF183Q96D59 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RNF183Q96D59 AC137630.3-201ENST00000607245 391 ntBASIC17.18■□□□□ 0.34
RNF183Q96D59 AC011551.1-201ENST00000614101 683 ntBASIC17.18■□□□□ 0.34
RNF183Q96D59 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF183Q96D59 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF183Q96D59 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF183Q96D59 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF183Q96D59 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.17■□□□□ 0.34
RNF183Q96D59 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF183Q96D59 ERN1-208ENST00000606895 2068 ntBASIC17.17■□□□□ 0.34
RNF183Q96D59 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF183Q96D59 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF183Q96D59 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms