Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC31.17■■■□□ 2.58
RAPGEF4Q8WZA2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
RAPGEF4Q8WZA2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.16■■■□□ 2.58
RAPGEF4Q8WZA2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF4Q8WZA2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF4Q8WZA2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF4Q8WZA2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
RAPGEF4Q8WZA2 AC005837.3-201ENST00000612163 286 ntBASIC31.14■■■□□ 2.58
RAPGEF4Q8WZA2 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.14■■■□□ 2.58
RAPGEF4Q8WZA2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RAPGEF4Q8WZA2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RAPGEF4Q8WZA2 AC090877.2-201ENST00000558441 1738 ntBASIC31.12■■■□□ 2.57
RAPGEF4Q8WZA2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
RAPGEF4Q8WZA2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.12■■■□□ 2.57
RAPGEF4Q8WZA2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RAPGEF4Q8WZA2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RAPGEF4Q8WZA2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.11■■■□□ 2.57
RAPGEF4Q8WZA2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
RAPGEF4Q8WZA2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF4Q8WZA2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF4Q8WZA2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.1■■■□□ 2.57
RAPGEF4Q8WZA2 SNX5-217ENST00000606557 1087 ntBASIC31.1■■■□□ 2.57
RAPGEF4Q8WZA2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.1■■■□□ 2.57
RAPGEF4Q8WZA2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RAPGEF4Q8WZA2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RAPGEF4Q8WZA2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RAPGEF4Q8WZA2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RAPGEF4Q8WZA2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RAPGEF4Q8WZA2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.08■■■□□ 2.57
RAPGEF4Q8WZA2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
RAPGEF4Q8WZA2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.08■■■□□ 2.57
RAPGEF4Q8WZA2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
RAPGEF4Q8WZA2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.08■■■□□ 2.57
RAPGEF4Q8WZA2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.07■■■□□ 2.57
RAPGEF4Q8WZA2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RAPGEF4Q8WZA2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.07■■■□□ 2.56
RAPGEF4Q8WZA2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RAPGEF4Q8WZA2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC31.07■■■□□ 2.56
RAPGEF4Q8WZA2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.07■■■□□ 2.56
RAPGEF4Q8WZA2 AC133561.4-201ENST00000566112 224 ntBASIC31.07■■■□□ 2.56
RAPGEF4Q8WZA2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.07■■■□□ 2.56
RAPGEF4Q8WZA2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RAPGEF4Q8WZA2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
RAPGEF4Q8WZA2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
RAPGEF4Q8WZA2 MIR6722-201ENST00000617286 78 ntBASIC31.06■■■□□ 2.56
RAPGEF4Q8WZA2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.06■■■□□ 2.56
RAPGEF4Q8WZA2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
RAPGEF4Q8WZA2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
RAPGEF4Q8WZA2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.05■■■□□ 2.56
RAPGEF4Q8WZA2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RAPGEF4Q8WZA2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RAPGEF4Q8WZA2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RAPGEF4Q8WZA2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RAPGEF4Q8WZA2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
RAPGEF4Q8WZA2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.03■■■□□ 2.56
RAPGEF4Q8WZA2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.03■■■□□ 2.56
RAPGEF4Q8WZA2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
RAPGEF4Q8WZA2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RAPGEF4Q8WZA2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.02■■■□□ 2.56
RAPGEF4Q8WZA2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RAPGEF4Q8WZA2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RAPGEF4Q8WZA2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
RAPGEF4Q8WZA2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
RAPGEF4Q8WZA2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.01■■■□□ 2.55
RAPGEF4Q8WZA2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
RAPGEF4Q8WZA2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.01■■■□□ 2.55
RAPGEF4Q8WZA2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RAPGEF4Q8WZA2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
RAPGEF4Q8WZA2 AC097639.1-201ENST00000565519 1891 ntBASIC31.01■■■□□ 2.55
RAPGEF4Q8WZA2 AC096887.2-201ENST00000623443 1957 ntBASIC31.01■■■□□ 2.55
RAPGEF4Q8WZA2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RAPGEF4Q8WZA2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RAPGEF4Q8WZA2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31■■■□□ 2.55
RAPGEF4Q8WZA2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31■■■□□ 2.55
RAPGEF4Q8WZA2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC31■■■□□ 2.55
RAPGEF4Q8WZA2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RAPGEF4Q8WZA2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
RAPGEF4Q8WZA2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF4Q8WZA2 ERN1-208ENST00000606895 2068 ntBASIC30.98■■■□□ 2.55
RAPGEF4Q8WZA2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF4Q8WZA2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.98■■■□□ 2.55
RAPGEF4Q8WZA2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF4Q8WZA2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF4Q8WZA2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF4Q8WZA2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
RAPGEF4Q8WZA2 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.97■■■□□ 2.55
RAPGEF4Q8WZA2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.97■■■□□ 2.55
RAPGEF4Q8WZA2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RAPGEF4Q8WZA2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RAPGEF4Q8WZA2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RAPGEF4Q8WZA2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms