Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
STAG1Q8WVM7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
STAG1Q8WVM7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
STAG1Q8WVM7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
STAG1Q8WVM7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
STAG1Q8WVM7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
STAG1Q8WVM7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.82■■■□□ 2.04
STAG1Q8WVM7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
STAG1Q8WVM7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.81■■■□□ 2.04
STAG1Q8WVM7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
STAG1Q8WVM7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.81■■■□□ 2.04
STAG1Q8WVM7 AC011551.1-201ENST00000614101 683 ntBASIC27.81■■■□□ 2.04
STAG1Q8WVM7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
STAG1Q8WVM7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.81■■■□□ 2.04
STAG1Q8WVM7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.8■■■□□ 2.04
STAG1Q8WVM7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
STAG1Q8WVM7 MIR6089-201ENST00000616698 64 ntBASIC27.8■■■□□ 2.04
STAG1Q8WVM7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
STAG1Q8WVM7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
STAG1Q8WVM7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
STAG1Q8WVM7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.78■■■□□ 2.04
STAG1Q8WVM7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
STAG1Q8WVM7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.78■■■□□ 2.04
STAG1Q8WVM7 THA1P-201ENST00000590384 1145 ntBASIC27.78■■■□□ 2.04
STAG1Q8WVM7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
STAG1Q8WVM7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
STAG1Q8WVM7 AC090877.2-201ENST00000558441 1738 ntBASIC27.78■■■□□ 2.04
STAG1Q8WVM7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
STAG1Q8WVM7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
STAG1Q8WVM7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.77■■■□□ 2.04
STAG1Q8WVM7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.77■■■□□ 2.04
STAG1Q8WVM7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
STAG1Q8WVM7 AC022211.4-201ENST00000625094 2161 ntBASIC27.77■■■□□ 2.04
STAG1Q8WVM7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.77■■■□□ 2.04
STAG1Q8WVM7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
STAG1Q8WVM7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
STAG1Q8WVM7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.76■■■□□ 2.04
STAG1Q8WVM7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.76■■■□□ 2.04
STAG1Q8WVM7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.76■■■□□ 2.03
STAG1Q8WVM7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
STAG1Q8WVM7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.76■■■□□ 2.03
STAG1Q8WVM7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.76■■■□□ 2.03
STAG1Q8WVM7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
STAG1Q8WVM7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
STAG1Q8WVM7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
STAG1Q8WVM7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.75■■■□□ 2.03
STAG1Q8WVM7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.75■■■□□ 2.03
STAG1Q8WVM7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
STAG1Q8WVM7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
STAG1Q8WVM7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
STAG1Q8WVM7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
STAG1Q8WVM7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
STAG1Q8WVM7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
STAG1Q8WVM7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
STAG1Q8WVM7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
STAG1Q8WVM7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
STAG1Q8WVM7 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.73■■■□□ 2.03
STAG1Q8WVM7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
STAG1Q8WVM7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.73■■■□□ 2.03
STAG1Q8WVM7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.72■■■□□ 2.03
STAG1Q8WVM7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
STAG1Q8WVM7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
STAG1Q8WVM7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
STAG1Q8WVM7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
STAG1Q8WVM7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 MIR4281-201ENST00000580852 62 ntBASIC27.71■■■□□ 2.03
STAG1Q8WVM7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
STAG1Q8WVM7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
STAG1Q8WVM7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
STAG1Q8WVM7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
STAG1Q8WVM7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
STAG1Q8WVM7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
STAG1Q8WVM7 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.7■■■□□ 2.02
STAG1Q8WVM7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.7■■■□□ 2.02
STAG1Q8WVM7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
STAG1Q8WVM7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.7■■■□□ 2.02
STAG1Q8WVM7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
STAG1Q8WVM7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
STAG1Q8WVM7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.68■■■□□ 2.02
STAG1Q8WVM7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
STAG1Q8WVM7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
STAG1Q8WVM7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms