Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR6722-201ENST00000617286 78 ntBASIC22.26■■□□□ 1.15
SNIP1Q8TAD8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 SRD5A1P1-201ENST00000442297 786 ntBASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNIP1Q8TAD8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNIP1Q8TAD8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.24■■□□□ 1.15
SNIP1Q8TAD8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.24■■□□□ 1.15
SNIP1Q8TAD8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
SNIP1Q8TAD8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNIP1Q8TAD8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 AC097381.1-201ENST00000429019 1296 ntBASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 AL136967.2-201ENST00000623968 743 ntBASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 AC139426.1-201ENST00000568218 2529 ntBASIC22.23■■□□□ 1.15
SNIP1Q8TAD8 AF213884.3-201ENST00000563833 479 ntBASIC22.22■■□□□ 1.15
SNIP1Q8TAD8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.22■■□□□ 1.15
SNIP1Q8TAD8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNIP1Q8TAD8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 SNX5-217ENST00000606557 1087 ntBASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 ABCB10P1-201ENST00000614297 2181 ntBASIC22.21■■□□□ 1.15
SNIP1Q8TAD8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 MIR939-201ENST00000401314 82 ntBASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNIP1Q8TAD8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SNIP1Q8TAD8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SNIP1Q8TAD8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SNIP1Q8TAD8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
SNIP1Q8TAD8 AC142472.1-201ENST00000612013 1741 ntBASIC22.18■■□□□ 1.14
SNIP1Q8TAD8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SNIP1Q8TAD8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SNIP1Q8TAD8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.18■■□□□ 1.14
SNIP1Q8TAD8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNIP1Q8TAD8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
SNIP1Q8TAD8 AL162430.1-201ENST00000480705 870 ntBASIC22.17■■□□□ 1.14
SNIP1Q8TAD8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SNIP1Q8TAD8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.17■■□□□ 1.14
SNIP1Q8TAD8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNIP1Q8TAD8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNIP1Q8TAD8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNIP1Q8TAD8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNIP1Q8TAD8 AC091305.1-201ENST00000479476 895 ntBASIC22.16■■□□□ 1.14
SNIP1Q8TAD8 AP001330.3-201ENST00000520123 633 ntBASIC22.16■■□□□ 1.14
SNIP1Q8TAD8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNIP1Q8TAD8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNIP1Q8TAD8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.15■■□□□ 1.14
SNIP1Q8TAD8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNIP1Q8TAD8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNIP1Q8TAD8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNIP1Q8TAD8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SNIP1Q8TAD8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.15■■□□□ 1.14
SNIP1Q8TAD8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 DUX4L19-201ENST00000557448 1267 ntBASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SNIP1Q8TAD8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SNIP1Q8TAD8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.13■■□□□ 1.13
SNIP1Q8TAD8 AC087623.3-201ENST00000607047 1098 ntBASIC22.13■■□□□ 1.13
SNIP1Q8TAD8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.13■■□□□ 1.13
SNIP1Q8TAD8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms