Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COMMD1Q8N668 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COMMD1Q8N668 RP9P-202ENST00000450133 1212 ntBASIC19.26■□□□□ 0.67
COMMD1Q8N668 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.26■□□□□ 0.67
COMMD1Q8N668 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COMMD1Q8N668 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COMMD1Q8N668 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COMMD1Q8N668 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COMMD1Q8N668 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COMMD1Q8N668 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
COMMD1Q8N668 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.25■□□□□ 0.67
COMMD1Q8N668 AC012354.3-201ENST00000623734 483 ntBASIC19.25■□□□□ 0.67
COMMD1Q8N668 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 LINC01124-201ENST00000409786 2117 ntBASIC19.25■□□□□ 0.67
COMMD1Q8N668 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COMMD1Q8N668 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COMMD1Q8N668 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD1Q8N668 U85056.1-201ENST00000616429 682 ntBASIC19.24■□□□□ 0.67
COMMD1Q8N668 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.24■□□□□ 0.67
COMMD1Q8N668 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD1Q8N668 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD1Q8N668 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD1Q8N668 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COMMD1Q8N668 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.23■□□□□ 0.67
COMMD1Q8N668 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COMMD1Q8N668 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
COMMD1Q8N668 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.23■□□□□ 0.67
COMMD1Q8N668 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD1Q8N668 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COMMD1Q8N668 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
COMMD1Q8N668 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD1Q8N668 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.22■□□□□ 0.67
COMMD1Q8N668 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.21■□□□□ 0.67
COMMD1Q8N668 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
COMMD1Q8N668 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.21■□□□□ 0.67
COMMD1Q8N668 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COMMD1Q8N668 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.21■□□□□ 0.67
COMMD1Q8N668 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
COMMD1Q8N668 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.21■□□□□ 0.67
COMMD1Q8N668 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD1Q8N668 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COMMD1Q8N668 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD1Q8N668 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD1Q8N668 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.2■□□□□ 0.66
COMMD1Q8N668 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD1Q8N668 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COMMD1Q8N668 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD1Q8N668 AC133552.2-201ENST00000619106 1032 ntBASIC19.2■□□□□ 0.66
COMMD1Q8N668 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD1Q8N668 AC096887.2-201ENST00000623443 1957 ntBASIC19.2■□□□□ 0.66
COMMD1Q8N668 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD1Q8N668 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.2■□□□□ 0.66
COMMD1Q8N668 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD1Q8N668 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD1Q8N668 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD1Q8N668 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD1Q8N668 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD1Q8N668 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.19■□□□□ 0.66
COMMD1Q8N668 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD1Q8N668 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD1Q8N668 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD1Q8N668 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.19■□□□□ 0.66
COMMD1Q8N668 AC093536.1-201ENST00000569153 554 ntBASIC19.19■□□□□ 0.66
COMMD1Q8N668 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD1Q8N668 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms