Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MIR6089-201ENST00000616698 64 ntBASIC24.07■■□□□ 1.44
ATPAF2Q8N5M1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
ATPAF2Q8N5M1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ATPAF2Q8N5M1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ATPAF2Q8N5M1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.06■■□□□ 1.44
ATPAF2Q8N5M1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 AP003733.4-201ENST00000623785 1697 ntBASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
ATPAF2Q8N5M1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATPAF2Q8N5M1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.04■■□□□ 1.44
ATPAF2Q8N5M1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATPAF2Q8N5M1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATPAF2Q8N5M1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.04■■□□□ 1.44
ATPAF2Q8N5M1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATPAF2Q8N5M1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.03■■□□□ 1.44
ATPAF2Q8N5M1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATPAF2Q8N5M1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ATPAF2Q8N5M1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
ATPAF2Q8N5M1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATPAF2Q8N5M1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.03■■□□□ 1.44
ATPAF2Q8N5M1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 PVT1_1.1-201ENST00000615125 194 ntBASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATPAF2Q8N5M1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.01■■□□□ 1.43
ATPAF2Q8N5M1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATPAF2Q8N5M1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATPAF2Q8N5M1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATPAF2Q8N5M1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 AC022616.5-201ENST00000518796 181 ntBASIC24■■□□□ 1.43
ATPAF2Q8N5M1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
ATPAF2Q8N5M1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.99■■□□□ 1.43
ATPAF2Q8N5M1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.99■■□□□ 1.43
ATPAF2Q8N5M1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATPAF2Q8N5M1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATPAF2Q8N5M1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATPAF2Q8N5M1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATPAF2Q8N5M1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
ATPAF2Q8N5M1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
ATPAF2Q8N5M1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ATPAF2Q8N5M1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.97■■□□□ 1.43
ATPAF2Q8N5M1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATPAF2Q8N5M1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATPAF2Q8N5M1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATPAF2Q8N5M1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATPAF2Q8N5M1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATPAF2Q8N5M1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATPAF2Q8N5M1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ATPAF2Q8N5M1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
ATPAF2Q8N5M1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.95■■□□□ 1.42
ATPAF2Q8N5M1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATPAF2Q8N5M1 AC090877.2-201ENST00000558441 1738 ntBASIC23.95■■□□□ 1.42
ATPAF2Q8N5M1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATPAF2Q8N5M1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms