Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ARHGEF39Q8N4T4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ARHGEF39Q8N4T4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ARHGEF39Q8N4T4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 MIR4281-201ENST00000580852 62 ntBASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 AC090877.2-201ENST00000558441 1738 ntBASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.28■■□□□ 1.16
ARHGEF39Q8N4T4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.27■■□□□ 1.16
ARHGEF39Q8N4T4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ARHGEF39Q8N4T4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.27■■□□□ 1.16
ARHGEF39Q8N4T4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 MIR6089-201ENST00000616698 64 ntBASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ARHGEF39Q8N4T4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ARHGEF39Q8N4T4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ARHGEF39Q8N4T4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ARHGEF39Q8N4T4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ARHGEF39Q8N4T4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ARHGEF39Q8N4T4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 AC137630.3-201ENST00000607245 391 ntBASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.24■■□□□ 1.15
ARHGEF39Q8N4T4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ARHGEF39Q8N4T4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARHGEF39Q8N4T4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.23■■□□□ 1.15
ARHGEF39Q8N4T4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ARHGEF39Q8N4T4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
ARHGEF39Q8N4T4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARHGEF39Q8N4T4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.23■■□□□ 1.15
ARHGEF39Q8N4T4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ARHGEF39Q8N4T4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
ARHGEF39Q8N4T4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.22■■□□□ 1.15
ARHGEF39Q8N4T4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.22■■□□□ 1.15
ARHGEF39Q8N4T4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ARHGEF39Q8N4T4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
ARHGEF39Q8N4T4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 Z92544.1-202ENST00000571933 1220 ntBASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 AF131216.4-201ENST00000638924 1588 ntBASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF39Q8N4T4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF39Q8N4T4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF39Q8N4T4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.2■■□□□ 1.14
ARHGEF39Q8N4T4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF39Q8N4T4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ARHGEF39Q8N4T4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF39Q8N4T4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF39Q8N4T4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
ARHGEF39Q8N4T4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
ARHGEF39Q8N4T4 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.19■■□□□ 1.14
ARHGEF39Q8N4T4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ARHGEF39Q8N4T4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ARHGEF39Q8N4T4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ARHGEF39Q8N4T4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ARHGEF39Q8N4T4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.19■■□□□ 1.14
ARHGEF39Q8N4T4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ARHGEF39Q8N4T4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
ARHGEF39Q8N4T4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ARHGEF39Q8N4T4 AC022211.4-201ENST00000625094 2161 ntBASIC22.18■■□□□ 1.14
ARHGEF39Q8N4T4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms