Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.95■■□□□ 1.43
CHPFQ8IZ52 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHPFQ8IZ52 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.95■■□□□ 1.42
CHPFQ8IZ52 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHPFQ8IZ52 MTDHP2-201ENST00000601468 714 ntBASIC23.95■■□□□ 1.42
CHPFQ8IZ52 AC010997.5-201ENST00000609182 354 ntBASIC23.95■■□□□ 1.42
CHPFQ8IZ52 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.95■■□□□ 1.42
CHPFQ8IZ52 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHPFQ8IZ52 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHPFQ8IZ52 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.94■■□□□ 1.42
CHPFQ8IZ52 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.93■■□□□ 1.42
CHPFQ8IZ52 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHPFQ8IZ52 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CHPFQ8IZ52 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.93■■□□□ 1.42
CHPFQ8IZ52 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.93■■□□□ 1.42
CHPFQ8IZ52 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
CHPFQ8IZ52 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHPFQ8IZ52 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.93■■□□□ 1.42
CHPFQ8IZ52 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.92■■□□□ 1.42
CHPFQ8IZ52 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHPFQ8IZ52 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.92■■□□□ 1.42
CHPFQ8IZ52 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
CHPFQ8IZ52 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.92■■□□□ 1.42
CHPFQ8IZ52 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.92■■□□□ 1.42
CHPFQ8IZ52 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHPFQ8IZ52 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHPFQ8IZ52 ERN1-208ENST00000606895 2068 ntBASIC23.9■■□□□ 1.42
CHPFQ8IZ52 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHPFQ8IZ52 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.89■■□□□ 1.41
CHPFQ8IZ52 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHPFQ8IZ52 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CHPFQ8IZ52 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHPFQ8IZ52 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHPFQ8IZ52 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.88■■□□□ 1.41
CHPFQ8IZ52 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.88■■□□□ 1.41
CHPFQ8IZ52 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.88■■□□□ 1.41
CHPFQ8IZ52 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHPFQ8IZ52 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHPFQ8IZ52 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHPFQ8IZ52 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHPFQ8IZ52 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHPFQ8IZ52 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.87■■□□□ 1.41
CHPFQ8IZ52 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHPFQ8IZ52 MIR6724-1-201ENST00000616420 92 ntBASIC23.87■■□□□ 1.41
CHPFQ8IZ52 MIR6724-2-201ENST00000616483 92 ntBASIC23.87■■□□□ 1.41
CHPFQ8IZ52 MIR6724-4-201ENST00000617390 92 ntBASIC23.87■■□□□ 1.41
CHPFQ8IZ52 MIR6724-3-201ENST00000622482 92 ntBASIC23.87■■□□□ 1.41
CHPFQ8IZ52 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.87■■□□□ 1.41
CHPFQ8IZ52 AC096887.2-201ENST00000623443 1957 ntBASIC23.87■■□□□ 1.41
CHPFQ8IZ52 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.86■■□□□ 1.41
CHPFQ8IZ52 AC097639.1-201ENST00000565519 1891 ntBASIC23.86■■□□□ 1.41
CHPFQ8IZ52 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CHPFQ8IZ52 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.86■■□□□ 1.41
CHPFQ8IZ52 AL117332.1-201ENST00000622628 974 ntBASIC23.86■■□□□ 1.41
CHPFQ8IZ52 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHPFQ8IZ52 AF131216.4-201ENST00000638924 1588 ntBASIC23.86■■□□□ 1.41
CHPFQ8IZ52 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 AC131281.2-201ENST00000520478 145 ntBASIC23.85■■□□□ 1.41
CHPFQ8IZ52 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHPFQ8IZ52 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHPFQ8IZ52 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.84■■□□□ 1.41
CHPFQ8IZ52 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHPFQ8IZ52 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.84■■□□□ 1.41
CHPFQ8IZ52 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CHPFQ8IZ52 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CHPFQ8IZ52 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.84■■□□□ 1.41
CHPFQ8IZ52 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.84■■□□□ 1.41
CHPFQ8IZ52 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHPFQ8IZ52 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CHPFQ8IZ52 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHPFQ8IZ52 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.83■■□□□ 1.41
CHPFQ8IZ52 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHPFQ8IZ52 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms