Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
ABCA9Q8IUA7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC36.51■■■■□ 3.43
ABCA9Q8IUA7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
ABCA9Q8IUA7 ABCB10P1-201ENST00000614297 2181 ntBASIC36.5■■■■□ 3.43
ABCA9Q8IUA7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
ABCA9Q8IUA7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
ABCA9Q8IUA7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC36.49■■■■□ 3.43
ABCA9Q8IUA7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC36.49■■■■□ 3.43
ABCA9Q8IUA7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC36.49■■■■□ 3.43
ABCA9Q8IUA7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC36.49■■■■□ 3.43
ABCA9Q8IUA7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC36.49■■■■□ 3.43
ABCA9Q8IUA7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
ABCA9Q8IUA7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC36.48■■■■□ 3.43
ABCA9Q8IUA7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC36.48■■■■□ 3.43
ABCA9Q8IUA7 GRAMD4P4-201ENST00000613563 1115 ntBASIC36.48■■■■□ 3.43
ABCA9Q8IUA7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC36.48■■■■□ 3.43
ABCA9Q8IUA7 SRD5A1P1-201ENST00000442297 786 ntBASIC36.48■■■■□ 3.43
ABCA9Q8IUA7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
ABCA9Q8IUA7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC36.47■■■■□ 3.43
ABCA9Q8IUA7 SF1-220ENST00000626028 704 ntTSL 2 BASIC36.47■■■■□ 3.43
ABCA9Q8IUA7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC36.47■■■■□ 3.43
ABCA9Q8IUA7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC36.46■■■■□ 3.43
ABCA9Q8IUA7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC36.45■■■■□ 3.43
ABCA9Q8IUA7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC36.45■■■■□ 3.43
ABCA9Q8IUA7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC36.45■■■■□ 3.43
ABCA9Q8IUA7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC36.45■■■■□ 3.43
ABCA9Q8IUA7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
ABCA9Q8IUA7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC36.45■■■■□ 3.43
ABCA9Q8IUA7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
ABCA9Q8IUA7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC36.45■■■■□ 3.43
ABCA9Q8IUA7 AL162430.1-201ENST00000480705 870 ntBASIC36.45■■■■□ 3.42
ABCA9Q8IUA7 AC087623.3-201ENST00000607047 1098 ntBASIC36.45■■■■□ 3.42
ABCA9Q8IUA7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC36.44■■■■□ 3.42
ABCA9Q8IUA7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
ABCA9Q8IUA7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
ABCA9Q8IUA7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC36.44■■■■□ 3.42
ABCA9Q8IUA7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC36.44■■■■□ 3.42
ABCA9Q8IUA7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC36.44■■■■□ 3.42
ABCA9Q8IUA7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
ABCA9Q8IUA7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC36.42■■■■□ 3.42
ABCA9Q8IUA7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC36.42■■■■□ 3.42
ABCA9Q8IUA7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
ABCA9Q8IUA7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
ABCA9Q8IUA7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC36.42■■■■□ 3.42
ABCA9Q8IUA7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
ABCA9Q8IUA7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
ABCA9Q8IUA7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC36.41■■■■□ 3.42
ABCA9Q8IUA7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC36.4■■■■□ 3.42
ABCA9Q8IUA7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC36.4■■■■□ 3.42
ABCA9Q8IUA7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
ABCA9Q8IUA7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC36.4■■■■□ 3.42
ABCA9Q8IUA7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
ABCA9Q8IUA7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC36.39■■■■□ 3.42
ABCA9Q8IUA7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.42
ABCA9Q8IUA7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
ABCA9Q8IUA7 AC091305.1-201ENST00000479476 895 ntBASIC36.38■■■■□ 3.41
ABCA9Q8IUA7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
ABCA9Q8IUA7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC36.38■■■■□ 3.41
ABCA9Q8IUA7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
ABCA9Q8IUA7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
ABCA9Q8IUA7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC36.37■■■■□ 3.41
ABCA9Q8IUA7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC36.37■■■■□ 3.41
ABCA9Q8IUA7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
ABCA9Q8IUA7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
ABCA9Q8IUA7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC36.36■■■■□ 3.41
ABCA9Q8IUA7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC36.36■■■■□ 3.41
ABCA9Q8IUA7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
ABCA9Q8IUA7 FOXO3B-201ENST00000395675 1928 ntBASIC36.36■■■■□ 3.41
ABCA9Q8IUA7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
ABCA9Q8IUA7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
ABCA9Q8IUA7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC36.34■■■■□ 3.41
ABCA9Q8IUA7 AP004609.3-201ENST00000610705 1884 ntBASIC36.34■■■■□ 3.41
ABCA9Q8IUA7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC36.34■■■■□ 3.41
ABCA9Q8IUA7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC36.34■■■■□ 3.41
ABCA9Q8IUA7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC36.33■■■■□ 3.41
ABCA9Q8IUA7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC36.32■■■■□ 3.41
ABCA9Q8IUA7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC36.32■■■■□ 3.41
ABCA9Q8IUA7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.41
ABCA9Q8IUA7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
ABCA9Q8IUA7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC36.32■■■■□ 3.4
ABCA9Q8IUA7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC36.32■■■■□ 3.4
ABCA9Q8IUA7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
ABCA9Q8IUA7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC36.31■■■■□ 3.4
ABCA9Q8IUA7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
ABCA9Q8IUA7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC36.3■■■■□ 3.4
ABCA9Q8IUA7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC36.3■■■■□ 3.4
ABCA9Q8IUA7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC36.3■■■■□ 3.4
ABCA9Q8IUA7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC36.3■■■■□ 3.4
ABCA9Q8IUA7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
ABCA9Q8IUA7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
ABCA9Q8IUA7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
ABCA9Q8IUA7 MIR4767-201ENST00000582827 78 ntBASIC36.29■■■■□ 3.4
ABCA9Q8IUA7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
ABCA9Q8IUA7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC36.28■■■■□ 3.4
ABCA9Q8IUA7 DUX4L19-201ENST00000557448 1267 ntBASIC36.28■■■■□ 3.4
ABCA9Q8IUA7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC36.27■■■■□ 3.4
ABCA9Q8IUA7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC36.27■■■■□ 3.4
ABCA9Q8IUA7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC36.26■■■■□ 3.4
ABCA9Q8IUA7 CA15P2-201ENST00000611168 834 ntBASIC36.26■■■■□ 3.4
ABCA9Q8IUA7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC36.26■■■■□ 3.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms