Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.1■■□□□ 1.45
CCDC25Q86WR0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC25Q86WR0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CCDC25Q86WR0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC25Q86WR0 AC068473.5-201ENST00000616428 2072 ntBASIC24.09■■□□□ 1.45
CCDC25Q86WR0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC25Q86WR0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CCDC25Q86WR0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC25Q86WR0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC25Q86WR0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.09■■□□□ 1.45
CCDC25Q86WR0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC25Q86WR0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.08■■□□□ 1.45
CCDC25Q86WR0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC25Q86WR0 AC012676.1-201ENST00000574705 1949 ntBASIC24.08■■□□□ 1.44
CCDC25Q86WR0 ABCB10P4-201ENST00000566803 2184 ntBASIC24.08■■□□□ 1.44
CCDC25Q86WR0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC25Q86WR0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC25Q86WR0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC25Q86WR0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC25Q86WR0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.06■■□□□ 1.44
CCDC25Q86WR0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC25Q86WR0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.06■■□□□ 1.44
CCDC25Q86WR0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CCDC25Q86WR0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
CCDC25Q86WR0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
CCDC25Q86WR0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC25Q86WR0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC25Q86WR0 AL157400.5-201ENST00000507624 621 ntBASIC24.03■■□□□ 1.44
CCDC25Q86WR0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CCDC25Q86WR0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC25Q86WR0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.02■■□□□ 1.44
CCDC25Q86WR0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.02■■□□□ 1.44
CCDC25Q86WR0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.02■■□□□ 1.44
CCDC25Q86WR0 MIR3648-2-201ENST00000581792 180 ntBASIC24.02■■□□□ 1.44
CCDC25Q86WR0 MIR3648-1-201ENST00000615959 180 ntBASIC24.02■■□□□ 1.44
CCDC25Q86WR0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC25Q86WR0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.02■■□□□ 1.44
CCDC25Q86WR0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC25Q86WR0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC25Q86WR0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CCDC25Q86WR0 DUSP8P5-201ENST00000422884 1815 ntBASIC24■■□□□ 1.43
CCDC25Q86WR0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24■■□□□ 1.43
CCDC25Q86WR0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC25Q86WR0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC25Q86WR0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24■■□□□ 1.43
CCDC25Q86WR0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC25Q86WR0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC25Q86WR0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC25Q86WR0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC25Q86WR0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC25Q86WR0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC25Q86WR0 MIR6089-201ENST00000616698 64 ntBASIC23.99■■□□□ 1.43
CCDC25Q86WR0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC25Q86WR0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC25Q86WR0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC25Q86WR0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC25Q86WR0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC25Q86WR0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC25Q86WR0 AC025884.2-201ENST00000553429 711 ntBASIC23.98■■□□□ 1.43
CCDC25Q86WR0 MIR3960-201ENST00000583311 91 ntBASIC23.98■■□□□ 1.43
CCDC25Q86WR0 AC016575.1-201ENST00000607026 382 ntBASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms