Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZFHX4Q86UP3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.4■■□□□ 1.18
ZFHX4Q86UP3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZFHX4Q86UP3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.4■■□□□ 1.18
ZFHX4Q86UP3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZFHX4Q86UP3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.39■■□□□ 1.18
ZFHX4Q86UP3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
ZFHX4Q86UP3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ZFHX4Q86UP3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ZFHX4Q86UP3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ZFHX4Q86UP3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.39■■□□□ 1.18
ZFHX4Q86UP3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.39■■□□□ 1.18
ZFHX4Q86UP3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ZFHX4Q86UP3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
ZFHX4Q86UP3 AF131216.4-201ENST00000638924 1588 ntBASIC22.39■■□□□ 1.17
ZFHX4Q86UP3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ZFHX4Q86UP3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.38■■□□□ 1.17
ZFHX4Q86UP3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZFHX4Q86UP3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
ZFHX4Q86UP3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZFHX4Q86UP3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZFHX4Q86UP3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 KRT18P5-201ENST00000436075 1291 ntBASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 MTDHP2-201ENST00000601468 714 ntBASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 AC011551.1-201ENST00000614101 683 ntBASIC22.37■■□□□ 1.17
ZFHX4Q86UP3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.36■■□□□ 1.17
ZFHX4Q86UP3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ZFHX4Q86UP3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFHX4Q86UP3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
ZFHX4Q86UP3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFHX4Q86UP3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.34■■□□□ 1.17
ZFHX4Q86UP3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.33■■□□□ 1.17
ZFHX4Q86UP3 RAP2CP1-201ENST00000605103 478 ntBASIC22.33■■□□□ 1.17
ZFHX4Q86UP3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.33■■□□□ 1.17
ZFHX4Q86UP3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZFHX4Q86UP3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
ZFHX4Q86UP3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
ZFHX4Q86UP3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.33■■□□□ 1.16
ZFHX4Q86UP3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.32■■□□□ 1.16
ZFHX4Q86UP3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFHX4Q86UP3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 RASA4CP-201ENST00000424092 1398 ntBASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.3■■□□□ 1.16
ZFHX4Q86UP3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFHX4Q86UP3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ZFHX4Q86UP3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ZFHX4Q86UP3 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.29■■□□□ 1.16
ZFHX4Q86UP3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ZFHX4Q86UP3 AL031602.1-201ENST00000633169 911 ntBASIC22.29■■□□□ 1.16
ZFHX4Q86UP3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZFHX4Q86UP3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFHX4Q86UP3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
ZFHX4Q86UP3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFHX4Q86UP3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFHX4Q86UP3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
ZFHX4Q86UP3 TMEM191A-211ENST00000637163 1067 ntBASIC22.27■■□□□ 1.16
ZFHX4Q86UP3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
ZFHX4Q86UP3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZFHX4Q86UP3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
ZFHX4Q86UP3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms