Protein–RNA interactions for Protein: Q7RTT6

SSX6, Putative protein SSX6, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX6Q7RTT6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSX6Q7RTT6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSX6Q7RTT6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.89■□□□□ 0.93
SSX6Q7RTT6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSX6Q7RTT6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSX6Q7RTT6 AC141586.4-201ENST00000624558 1573 ntBASIC20.89■□□□□ 0.93
SSX6Q7RTT6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SSX6Q7RTT6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 AC060814.1-201ENST00000554326 538 ntBASIC20.88■□□□□ 0.93
SSX6Q7RTT6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX6Q7RTT6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.87■□□□□ 0.93
SSX6Q7RTT6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX6Q7RTT6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX6Q7RTT6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSX6Q7RTT6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.85■□□□□ 0.93
SSX6Q7RTT6 MIR3960-201ENST00000583311 91 ntBASIC20.85■□□□□ 0.93
SSX6Q7RTT6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX6Q7RTT6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX6Q7RTT6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SSX6Q7RTT6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.85■□□□□ 0.93
SSX6Q7RTT6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.84■□□□□ 0.93
SSX6Q7RTT6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SSX6Q7RTT6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SSX6Q7RTT6 MIR6089-201ENST00000616698 64 ntBASIC20.84■□□□□ 0.93
SSX6Q7RTT6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSX6Q7RTT6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX6Q7RTT6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.83■□□□□ 0.93
SSX6Q7RTT6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSX6Q7RTT6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSX6Q7RTT6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSX6Q7RTT6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.83■□□□□ 0.93
SSX6Q7RTT6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.83■□□□□ 0.93
SSX6Q7RTT6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SSX6Q7RTT6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
SSX6Q7RTT6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
SSX6Q7RTT6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
SSX6Q7RTT6 SMPD5-203ENST00000639008 1464 ntBASIC20.82■□□□□ 0.92
SSX6Q7RTT6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SSX6Q7RTT6 ABCB10P4-201ENST00000566803 2184 ntBASIC20.82■□□□□ 0.92
SSX6Q7RTT6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX6Q7RTT6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX6Q7RTT6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX6Q7RTT6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.82■□□□□ 0.92
SSX6Q7RTT6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX6Q7RTT6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SSX6Q7RTT6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX6Q7RTT6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX6Q7RTT6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX6Q7RTT6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX6Q7RTT6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX6Q7RTT6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX6Q7RTT6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX6Q7RTT6 AC092296.2-201ENST00000589470 999 ntBASIC20.8■□□□□ 0.92
SSX6Q7RTT6 AC068473.5-201ENST00000616428 2072 ntBASIC20.8■□□□□ 0.92
SSX6Q7RTT6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
SSX6Q7RTT6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSX6Q7RTT6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SSX6Q7RTT6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSX6Q7RTT6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.79■□□□□ 0.92
SSX6Q7RTT6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SSX6Q7RTT6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.78■□□□□ 0.92
SSX6Q7RTT6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSX6Q7RTT6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms