Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.61■■□□□ 1.53
PTCRAQ6ISU1 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.61■■□□□ 1.53
PTCRAQ6ISU1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTCRAQ6ISU1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.61■■□□□ 1.53
PTCRAQ6ISU1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.6■■□□□ 1.53
PTCRAQ6ISU1 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.6■■□□□ 1.53
PTCRAQ6ISU1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.6■■□□□ 1.53
PTCRAQ6ISU1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCRAQ6ISU1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTCRAQ6ISU1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 RASA4CP-201ENST00000424092 1398 ntBASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCRAQ6ISU1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.58■■□□□ 1.53
PTCRAQ6ISU1 MIR4767-201ENST00000582827 78 ntBASIC24.58■■□□□ 1.53
PTCRAQ6ISU1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.58■■□□□ 1.53
PTCRAQ6ISU1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PTCRAQ6ISU1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PTCRAQ6ISU1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCRAQ6ISU1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PTCRAQ6ISU1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.57■■□□□ 1.52
PTCRAQ6ISU1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
PTCRAQ6ISU1 IRS3P-201ENST00000223076 1006 ntBASIC24.56■■□□□ 1.52
PTCRAQ6ISU1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.56■■□□□ 1.52
PTCRAQ6ISU1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PTCRAQ6ISU1 SYT6-210ENST00000641643 1587 ntBASIC24.55■■□□□ 1.52
PTCRAQ6ISU1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PTCRAQ6ISU1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PTCRAQ6ISU1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 IKBKGP1-201ENST00000612193 1073 ntBASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.54■■□□□ 1.52
PTCRAQ6ISU1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCRAQ6ISU1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 AC027682.1-201ENST00000562846 899 ntBASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PTCRAQ6ISU1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PTCRAQ6ISU1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.51■■□□□ 1.51
PTCRAQ6ISU1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.51■■□□□ 1.51
PTCRAQ6ISU1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.51■■□□□ 1.51
PTCRAQ6ISU1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
PTCRAQ6ISU1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PTCRAQ6ISU1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.5■■□□□ 1.51
PTCRAQ6ISU1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
PTCRAQ6ISU1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.5■■□□□ 1.51
PTCRAQ6ISU1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.5■■□□□ 1.51
PTCRAQ6ISU1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PTCRAQ6ISU1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PTCRAQ6ISU1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PTCRAQ6ISU1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PTCRAQ6ISU1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PTCRAQ6ISU1 AL137784.2-201ENST00000607332 1000 ntBASIC24.49■■□□□ 1.51
PTCRAQ6ISU1 AC092171.4-201ENST00000609130 632 ntBASIC24.49■■□□□ 1.51
PTCRAQ6ISU1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PTCRAQ6ISU1 AC142472.1-201ENST00000612013 1741 ntBASIC24.49■■□□□ 1.51
PTCRAQ6ISU1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PTCRAQ6ISU1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PTCRAQ6ISU1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.48■■□□□ 1.51
PTCRAQ6ISU1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.48■■□□□ 1.51
PTCRAQ6ISU1 AC022517.1-201ENST00000592429 346 ntBASIC24.48■■□□□ 1.51
PTCRAQ6ISU1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
PTCRAQ6ISU1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
PTCRAQ6ISU1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PTCRAQ6ISU1 AC008764.7-201ENST00000593779 1081 ntBASIC24.47■■□□□ 1.51
PTCRAQ6ISU1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PTCRAQ6ISU1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PTCRAQ6ISU1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PTCRAQ6ISU1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms