Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC106739.1-201ENST00000617035 715 ntBASIC16.08■□□□□ 0.16
VPS13DQ5THJ4 AL356740.2-201ENST00000601559 647 ntBASIC16.08■□□□□ 0.16
VPS13DQ5THJ4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.08■□□□□ 0.16
VPS13DQ5THJ4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS13DQ5THJ4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 AL355001.2-201ENST00000620617 1191 ntBASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS13DQ5THJ4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 AP001330.3-201ENST00000520123 633 ntBASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 MIR6821-201ENST00000617625 74 ntBASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13DQ5THJ4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 MIR939-201ENST00000401314 82 ntBASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 AC096887.2-201ENST00000623443 1957 ntBASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 FOXO3B-201ENST00000395675 1928 ntBASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 AP004609.3-201ENST00000610705 1884 ntBASIC16.05■□□□□ 0.16
VPS13DQ5THJ4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 AC142381.2-201ENST00000566120 298 ntBASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS13DQ5THJ4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 AC104564.3-201ENST00000582367 638 ntBASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 AL136967.2-201ENST00000623968 743 ntBASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13DQ5THJ4 AL162430.1-201ENST00000480705 870 ntBASIC16.02■□□□□ 0.16
VPS13DQ5THJ4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.02■□□□□ 0.16
VPS13DQ5THJ4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13DQ5THJ4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.02■□□□□ 0.16
VPS13DQ5THJ4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13DQ5THJ4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13DQ5THJ4 PBX2P1-201ENST00000493219 1291 ntBASIC16.02■□□□□ 0.15
VPS13DQ5THJ4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13DQ5THJ4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13DQ5THJ4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13DQ5THJ4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 AC087623.3-201ENST00000607047 1098 ntBASIC16.01■□□□□ 0.15
VPS13DQ5THJ4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS13DQ5THJ4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VPS13DQ5THJ4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
VPS13DQ5THJ4 AK3-203ENST00000447596 705 ntTSL 2 BASIC16■□□□□ 0.15
VPS13DQ5THJ4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS13DQ5THJ4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16■□□□□ 0.15
VPS13DQ5THJ4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS13DQ5THJ4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13DQ5THJ4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.98■□□□□ 0.15
VPS13DQ5THJ4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.98■□□□□ 0.15
VPS13DQ5THJ4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms