Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
VARS2Q5ST30 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
VARS2Q5ST30 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
VARS2Q5ST30 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.06■■□□□ 1.6
VARS2Q5ST30 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.06■■□□□ 1.6
VARS2Q5ST30 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.06■■□□□ 1.6
VARS2Q5ST30 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
VARS2Q5ST30 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
VARS2Q5ST30 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.05■■□□□ 1.6
VARS2Q5ST30 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.05■■□□□ 1.6
VARS2Q5ST30 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.04■■□□□ 1.6
VARS2Q5ST30 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
VARS2Q5ST30 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.04■■□□□ 1.6
VARS2Q5ST30 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
VARS2Q5ST30 AF131216.4-201ENST00000638924 1588 ntBASIC25.04■■□□□ 1.6
VARS2Q5ST30 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
VARS2Q5ST30 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
VARS2Q5ST30 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.04■■□□□ 1.6
VARS2Q5ST30 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
VARS2Q5ST30 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.04■■□□□ 1.6
VARS2Q5ST30 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
VARS2Q5ST30 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
VARS2Q5ST30 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.03■■□□□ 1.6
VARS2Q5ST30 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
VARS2Q5ST30 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.03■■□□□ 1.6
VARS2Q5ST30 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.03■■□□□ 1.6
VARS2Q5ST30 AC090877.2-201ENST00000558441 1738 ntBASIC25.03■■□□□ 1.6
VARS2Q5ST30 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
VARS2Q5ST30 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
VARS2Q5ST30 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
VARS2Q5ST30 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.02■■□□□ 1.6
VARS2Q5ST30 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
VARS2Q5ST30 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.02■■□□□ 1.6
VARS2Q5ST30 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
VARS2Q5ST30 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
VARS2Q5ST30 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VARS2Q5ST30 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
VARS2Q5ST30 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.01■■□□□ 1.59
VARS2Q5ST30 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VARS2Q5ST30 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
VARS2Q5ST30 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.01■■□□□ 1.59
VARS2Q5ST30 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
VARS2Q5ST30 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
VARS2Q5ST30 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VARS2Q5ST30 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
VARS2Q5ST30 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VARS2Q5ST30 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
VARS2Q5ST30 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25■■□□□ 1.59
VARS2Q5ST30 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25■■□□□ 1.59
VARS2Q5ST30 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25■■□□□ 1.59
VARS2Q5ST30 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25■■□□□ 1.59
VARS2Q5ST30 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VARS2Q5ST30 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
VARS2Q5ST30 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
VARS2Q5ST30 AC010997.5-201ENST00000609182 354 ntBASIC24.99■■□□□ 1.59
VARS2Q5ST30 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
VARS2Q5ST30 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.98■■□□□ 1.59
VARS2Q5ST30 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
VARS2Q5ST30 AC008406.3-201ENST00000620001 1374 ntBASIC24.98■■□□□ 1.59
VARS2Q5ST30 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.98■■□□□ 1.59
VARS2Q5ST30 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.98■■□□□ 1.59
VARS2Q5ST30 MTDHP2-201ENST00000601468 714 ntBASIC24.97■■□□□ 1.59
VARS2Q5ST30 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.96■■□□□ 1.59
VARS2Q5ST30 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.96■■□□□ 1.59
VARS2Q5ST30 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
VARS2Q5ST30 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.95■■□□□ 1.58
VARS2Q5ST30 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VARS2Q5ST30 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
VARS2Q5ST30 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.95■■□□□ 1.58
VARS2Q5ST30 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.95■■□□□ 1.58
VARS2Q5ST30 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VARS2Q5ST30 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VARS2Q5ST30 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.95■■□□□ 1.58
VARS2Q5ST30 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
VARS2Q5ST30 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VARS2Q5ST30 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.94■■□□□ 1.58
VARS2Q5ST30 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.94■■□□□ 1.58
VARS2Q5ST30 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.94■■□□□ 1.58
VARS2Q5ST30 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.94■■□□□ 1.58
VARS2Q5ST30 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VARS2Q5ST30 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VARS2Q5ST30 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
VARS2Q5ST30 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VARS2Q5ST30 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.93■■□□□ 1.58
VARS2Q5ST30 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
VARS2Q5ST30 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VARS2Q5ST30 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VARS2Q5ST30 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.93■■□□□ 1.58
VARS2Q5ST30 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
VARS2Q5ST30 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
VARS2Q5ST30 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VARS2Q5ST30 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.92■■□□□ 1.58
VARS2Q5ST30 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VARS2Q5ST30 MIR6724-1-201ENST00000616420 92 ntBASIC24.92■■□□□ 1.58
VARS2Q5ST30 MIR6724-2-201ENST00000616483 92 ntBASIC24.92■■□□□ 1.58
VARS2Q5ST30 MIR6724-4-201ENST00000617390 92 ntBASIC24.92■■□□□ 1.58
VARS2Q5ST30 MIR6724-3-201ENST00000622482 92 ntBASIC24.92■■□□□ 1.58
VARS2Q5ST30 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
VARS2Q5ST30 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VARS2Q5ST30 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms