Protein–RNA interactions for Protein: Q3C1V0

MS4A18, Membrane-spanning 4-domains subfamily A member 18, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A18Q3C1V0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.01■□□□□ 0.95
MS4A18Q3C1V0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21■□□□□ 0.95
MS4A18Q3C1V0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21■□□□□ 0.95
MS4A18Q3C1V0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21■□□□□ 0.95
MS4A18Q3C1V0 HYI-210ENST00000486909 905 ntTSL 5 BASIC21■□□□□ 0.95
MS4A18Q3C1V0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21■□□□□ 0.95
MS4A18Q3C1V0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
MS4A18Q3C1V0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MS4A18Q3C1V0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 TSPY13P-201ENST00000338964 914 ntBASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.98■□□□□ 0.95
MS4A18Q3C1V0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 AL592295.1-201ENST00000400984 884 ntBASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 AC093323.1-202ENST00000635031 2045 ntBASIC20.97■□□□□ 0.95
MS4A18Q3C1V0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 AC139795.1-202ENST00000500444 432 ntBASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MS4A18Q3C1V0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 AC019171.1-201ENST00000601251 1056 ntBASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 AC012354.3-201ENST00000623734 483 ntBASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 LINC01124-201ENST00000409786 2117 ntBASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.95■□□□□ 0.94
MS4A18Q3C1V0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A18Q3C1V0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A18Q3C1V0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A18Q3C1V0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A18Q3C1V0 BHLHE23-202ENST00000612929 1109 ntBASIC20.93■□□□□ 0.94
MS4A18Q3C1V0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A18Q3C1V0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A18Q3C1V0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 AL033527.3-201ENST00000566366 1196 ntBASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A18Q3C1V0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms