Protein–RNA interactions for Protein: Q15822

CHRNA2, Neuronal acetylcholine receptor subunit alpha-2, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2Q15822 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.77■■■□□ 2.68
CHRNA2Q15822 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHRNA2Q15822 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CHRNA2Q15822 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CHRNA2Q15822 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.76■■■□□ 2.67
CHRNA2Q15822 AC024257.2-201ENST00000549699 147 ntBASIC31.76■■■□□ 2.67
CHRNA2Q15822 AC104564.3-201ENST00000582367 638 ntBASIC31.76■■■□□ 2.67
CHRNA2Q15822 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CHRNA2Q15822 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CHRNA2Q15822 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.76■■■□□ 2.67
CHRNA2Q15822 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
CHRNA2Q15822 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.75■■■□□ 2.67
CHRNA2Q15822 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHRNA2Q15822 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.75■■■□□ 2.67
CHRNA2Q15822 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CHRNA2Q15822 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.74■■■□□ 2.67
CHRNA2Q15822 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
CHRNA2Q15822 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHRNA2Q15822 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CHRNA2Q15822 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.73■■■□□ 2.67
CHRNA2Q15822 MIR5787-201ENST00000611784 55 ntBASIC31.73■■■□□ 2.67
CHRNA2Q15822 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.73■■■□□ 2.67
CHRNA2Q15822 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHRNA2Q15822 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHRNA2Q15822 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CHRNA2Q15822 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHRNA2Q15822 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHRNA2Q15822 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
CHRNA2Q15822 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CHRNA2Q15822 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
CHRNA2Q15822 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA2Q15822 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA2Q15822 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA2Q15822 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA2Q15822 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA2Q15822 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA2Q15822 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.71■■■□□ 2.67
CHRNA2Q15822 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA2Q15822 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.71■■■□□ 2.67
CHRNA2Q15822 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.71■■■□□ 2.67
CHRNA2Q15822 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.7■■■□□ 2.67
CHRNA2Q15822 FOXO3B-201ENST00000395675 1928 ntBASIC31.7■■■□□ 2.67
CHRNA2Q15822 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CHRNA2Q15822 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
CHRNA2Q15822 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHRNA2Q15822 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHRNA2Q15822 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.69■■■□□ 2.66
CHRNA2Q15822 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHRNA2Q15822 AC105265.2-201ENST00000467189 838 ntBASIC31.69■■■□□ 2.66
CHRNA2Q15822 MIR6722-201ENST00000617286 78 ntBASIC31.69■■■□□ 2.66
CHRNA2Q15822 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
CHRNA2Q15822 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHRNA2Q15822 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.68■■■□□ 2.66
CHRNA2Q15822 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHRNA2Q15822 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
CHRNA2Q15822 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHRNA2Q15822 EDA-201ENST00000338901 1233 ntBASIC31.67■■■□□ 2.66
CHRNA2Q15822 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHRNA2Q15822 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHRNA2Q15822 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.67■■■□□ 2.66
CHRNA2Q15822 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHRNA2Q15822 AL355001.2-201ENST00000620617 1191 ntBASIC31.67■■■□□ 2.66
CHRNA2Q15822 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.67■■■□□ 2.66
CHRNA2Q15822 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHRNA2Q15822 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
CHRNA2Q15822 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHRNA2Q15822 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHRNA2Q15822 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHRNA2Q15822 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHRNA2Q15822 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.64■■■□□ 2.66
CHRNA2Q15822 SRD5A1P1-201ENST00000442297 786 ntBASIC31.64■■■□□ 2.66
CHRNA2Q15822 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.64■■■□□ 2.66
CHRNA2Q15822 AL136967.2-201ENST00000623968 743 ntBASIC31.64■■■□□ 2.66
CHRNA2Q15822 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.64■■■□□ 2.66
CHRNA2Q15822 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHRNA2Q15822 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.63■■■□□ 2.65
CHRNA2Q15822 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHRNA2Q15822 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHRNA2Q15822 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.62■■■□□ 2.65
CHRNA2Q15822 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHRNA2Q15822 AF213884.3-201ENST00000563833 479 ntBASIC31.62■■■□□ 2.65
CHRNA2Q15822 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
CHRNA2Q15822 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.61■■■□□ 2.65
CHRNA2Q15822 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
CHRNA2Q15822 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.6■■■□□ 2.65
CHRNA2Q15822 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.6■■■□□ 2.65
CHRNA2Q15822 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CHRNA2Q15822 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
CHRNA2Q15822 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHRNA2Q15822 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHRNA2Q15822 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.59■■■□□ 2.65
CHRNA2Q15822 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHRNA2Q15822 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
CHRNA2Q15822 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHRNA2Q15822 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.58■■■□□ 2.65
CHRNA2Q15822 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHRNA2Q15822 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHRNA2Q15822 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHRNA2Q15822 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHRNA2Q15822 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms