Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H3AP68431 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H3AP68431 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H3AP68431 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.52■□□□□ 0.88
HIST1H3AP68431 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H3AP68431 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H3AP68431 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H3AP68431 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H3AP68431 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.52■□□□□ 0.88
HIST1H3AP68431 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H3AP68431 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H3AP68431 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.51■□□□□ 0.87
HIST1H3AP68431 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H3AP68431 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H3AP68431 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
HIST1H3AP68431 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.5■□□□□ 0.87
HIST1H3AP68431 LONRF2P2-201ENST00000439212 571 ntBASIC20.5■□□□□ 0.87
HIST1H3AP68431 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H3AP68431 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H3AP68431 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H3AP68431 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.5■□□□□ 0.87
HIST1H3AP68431 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H3AP68431 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HIST1H3AP68431 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HIST1H3AP68431 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H3AP68431 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H3AP68431 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H3AP68431 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H3AP68431 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H3AP68431 LINC00543-201ENST00000567234 1845 ntBASIC20.49■□□□□ 0.87
HIST1H3AP68431 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.49■□□□□ 0.87
HIST1H3AP68431 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H3AP68431 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.49■□□□□ 0.87
HIST1H3AP68431 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H3AP68431 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H3AP68431 LINC01124-201ENST00000409786 2117 ntBASIC20.48■□□□□ 0.87
HIST1H3AP68431 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.48■□□□□ 0.87
HIST1H3AP68431 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H3AP68431 AC141586.4-201ENST00000624558 1573 ntBASIC20.48■□□□□ 0.87
HIST1H3AP68431 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.48■□□□□ 0.87
HIST1H3AP68431 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H3AP68431 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H3AP68431 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H3AP68431 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H3AP68431 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H3AP68431 AL592295.1-201ENST00000400984 884 ntBASIC20.47■□□□□ 0.87
HIST1H3AP68431 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.47■□□□□ 0.87
HIST1H3AP68431 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H3AP68431 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H3AP68431 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
HIST1H3AP68431 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST1H3AP68431 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HIST1H3AP68431 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST1H3AP68431 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST1H3AP68431 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HIST1H3AP68431 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.45■□□□□ 0.87
HIST1H3AP68431 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H3AP68431 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H3AP68431 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H3AP68431 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H3AP68431 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.45■□□□□ 0.86
HIST1H3AP68431 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H3AP68431 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
HIST1H3AP68431 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H3AP68431 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.45■□□□□ 0.86
HIST1H3AP68431 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.45■□□□□ 0.86
HIST1H3AP68431 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H3AP68431 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H3AP68431 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.44■□□□□ 0.86
HIST1H3AP68431 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST1H3AP68431 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.44■□□□□ 0.86
HIST1H3AP68431 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST1H3AP68431 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.44■□□□□ 0.86
HIST1H3AP68431 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.44■□□□□ 0.86
HIST1H3AP68431 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HIST1H3AP68431 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST1H3AP68431 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HIST1H3AP68431 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H3AP68431 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.43■□□□□ 0.86
HIST1H3AP68431 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H3AP68431 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H3AP68431 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H3AP68431 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H3AP68431 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.43■□□□□ 0.86
HIST1H3AP68431 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.43■□□□□ 0.86
HIST1H3AP68431 AC019171.1-201ENST00000601251 1056 ntBASIC20.43■□□□□ 0.86
HIST1H3AP68431 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
HIST1H3AP68431 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H3AP68431 HLA-L-211ENST00000482052 1765 ntBASIC20.43■□□□□ 0.86
HIST1H3AP68431 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H3AP68431 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST1H3AP68431 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms