Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN20P56880 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN20P56880 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLDN20P56880 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.44■■□□□ 1.02
CLDN20P56880 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN20P56880 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLDN20P56880 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN20P56880 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN20P56880 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLDN20P56880 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN20P56880 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN20P56880 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN20P56880 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN20P56880 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN20P56880 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CLDN20P56880 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLDN20P56880 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN20P56880 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN20P56880 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
CLDN20P56880 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.42■■□□□ 1.02
CLDN20P56880 AC103834.1-201ENST00000520383 144 ntBASIC21.42■■□□□ 1.02
CLDN20P56880 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.42■■□□□ 1.02
CLDN20P56880 AC019171.1-201ENST00000601251 1056 ntBASIC21.42■■□□□ 1.02
CLDN20P56880 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CLDN20P56880 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.42■■□□□ 1.02
CLDN20P56880 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CLDN20P56880 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN20P56880 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN20P56880 AC133561.1-201ENST00000568600 2415 ntBASIC21.41■■□□□ 1.02
CLDN20P56880 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
CLDN20P56880 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CLDN20P56880 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN20P56880 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN20P56880 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN20P56880 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN20P56880 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN20P56880 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN20P56880 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CLDN20P56880 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.4■■□□□ 1.02
CLDN20P56880 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.4■■□□□ 1.02
CLDN20P56880 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CLDN20P56880 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN20P56880 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN20P56880 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.39■■□□□ 1.01
CLDN20P56880 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN20P56880 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN20P56880 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN20P56880 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN20P56880 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
CLDN20P56880 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN20P56880 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN20P56880 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN20P56880 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.38■■□□□ 1.01
CLDN20P56880 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.37■■□□□ 1.01
CLDN20P56880 AC097639.1-201ENST00000565519 1891 ntBASIC21.37■■□□□ 1.01
CLDN20P56880 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN20P56880 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CLDN20P56880 YBX1P4-201ENST00000392794 808 ntBASIC21.37■■□□□ 1.01
CLDN20P56880 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.37■■□□□ 1.01
CLDN20P56880 MIR4508-201ENST00000584178 70 ntBASIC21.37■■□□□ 1.01
CLDN20P56880 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN20P56880 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN20P56880 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN20P56880 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.36■■□□□ 1.01
CLDN20P56880 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CLDN20P56880 AC012676.1-201ENST00000574705 1949 ntBASIC21.36■■□□□ 1.01
CLDN20P56880 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CLDN20P56880 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CLDN20P56880 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CLDN20P56880 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.36■■□□□ 1.01
CLDN20P56880 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN20P56880 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.35■■□□□ 1.01
CLDN20P56880 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN20P56880 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN20P56880 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN20P56880 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CLDN20P56880 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN20P56880 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN20P56880 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.35■■□□□ 1.01
CLDN20P56880 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.35■■□□□ 1.01
CLDN20P56880 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.35■■□□□ 1.01
CLDN20P56880 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN20P56880 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN20P56880 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CLDN20P56880 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.35■■□□□ 1.01
CLDN20P56880 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CLDN20P56880 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN20P56880 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN20P56880 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN20P56880 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CLDN20P56880 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CLDN20P56880 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms