Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN12P56749 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN12P56749 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN12P56749 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN12P56749 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN12P56749 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.33■□□□□ 0.85
CLDN12P56749 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN12P56749 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN12P56749 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CLDN12P56749 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN12P56749 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN12P56749 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLDN12P56749 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN12P56749 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CLDN12P56749 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLDN12P56749 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN12P56749 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN12P56749 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLDN12P56749 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN12P56749 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN12P56749 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLDN12P56749 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN12P56749 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN12P56749 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN12P56749 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN12P56749 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN12P56749 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN12P56749 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN12P56749 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN12P56749 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN12P56749 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN12P56749 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN12P56749 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN12P56749 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLDN12P56749 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN12P56749 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN12P56749 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN12P56749 AC079834.2-201ENST00000609776 1949 ntBASIC20.28■□□□□ 0.84
CLDN12P56749 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN12P56749 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CLDN12P56749 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN12P56749 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLDN12P56749 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN12P56749 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
CLDN12P56749 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN12P56749 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN12P56749 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN12P56749 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN12P56749 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN12P56749 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN12P56749 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN12P56749 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN12P56749 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN12P56749 AC126177.7-201ENST00000547904 679 ntBASIC20.27■□□□□ 0.84
CLDN12P56749 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLDN12P56749 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.27■□□□□ 0.83
CLDN12P56749 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN12P56749 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN12P56749 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN12P56749 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN12P56749 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN12P56749 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLDN12P56749 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN12P56749 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN12P56749 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN12P56749 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN12P56749 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.25■□□□□ 0.83
CLDN12P56749 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN12P56749 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN12P56749 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN12P56749 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN12P56749 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLDN12P56749 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN12P56749 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN12P56749 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLDN12P56749 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN12P56749 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN12P56749 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN12P56749 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
CLDN12P56749 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN12P56749 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN12P56749 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN12P56749 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN12P56749 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN12P56749 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CLDN12P56749 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN12P56749 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN12P56749 MIR6089-201ENST00000616698 64 ntBASIC20.23■□□□□ 0.83
CLDN12P56749 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN12P56749 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN12P56749 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN12P56749 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN12P56749 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.23■□□□□ 0.83
CLDN12P56749 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN12P56749 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN12P56749 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLDN12P56749 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN12P56749 RPS2P35-201ENST00000443417 897 ntBASIC20.22■□□□□ 0.83
CLDN12P56749 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN12P56749 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms