Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CX3CR1P49238 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.54■□□□□ 0.88
CX3CR1P49238 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CX3CR1P49238 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.54■□□□□ 0.88
CX3CR1P49238 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CX3CR1P49238 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CX3CR1P49238 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.53■□□□□ 0.88
CX3CR1P49238 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.53■□□□□ 0.88
CX3CR1P49238 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
CX3CR1P49238 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CX3CR1P49238 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.53■□□□□ 0.88
CX3CR1P49238 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CX3CR1P49238 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CX3CR1P49238 MIR6089-201ENST00000616698 64 ntBASIC20.53■□□□□ 0.88
CX3CR1P49238 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CX3CR1P49238 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.53■□□□□ 0.88
CX3CR1P49238 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.53■□□□□ 0.88
CX3CR1P49238 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CX3CR1P49238 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.53■□□□□ 0.88
CX3CR1P49238 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CX3CR1P49238 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CX3CR1P49238 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CX3CR1P49238 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.52■□□□□ 0.88
CX3CR1P49238 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CX3CR1P49238 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CX3CR1P49238 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.52■□□□□ 0.88
CX3CR1P49238 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CX3CR1P49238 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.52■□□□□ 0.87
CX3CR1P49238 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CX3CR1P49238 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CX3CR1P49238 FOXO3B-201ENST00000395675 1928 ntBASIC20.51■□□□□ 0.87
CX3CR1P49238 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CX3CR1P49238 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CX3CR1P49238 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CX3CR1P49238 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CX3CR1P49238 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.51■□□□□ 0.87
CX3CR1P49238 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.51■□□□□ 0.87
CX3CR1P49238 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CX3CR1P49238 RARRES2P2-201ENST00000394842 485 ntBASIC20.5■□□□□ 0.87
CX3CR1P49238 AL592293.1-201ENST00000502889 1188 ntBASIC20.5■□□□□ 0.87
CX3CR1P49238 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CX3CR1P49238 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CX3CR1P49238 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CX3CR1P49238 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CX3CR1P49238 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.5■□□□□ 0.87
CX3CR1P49238 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CX3CR1P49238 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CX3CR1P49238 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.49■□□□□ 0.87
CX3CR1P49238 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
CX3CR1P49238 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CX3CR1P49238 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CX3CR1P49238 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.49■□□□□ 0.87
CX3CR1P49238 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CX3CR1P49238 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CX3CR1P49238 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CX3CR1P49238 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CX3CR1P49238 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CX3CR1P49238 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CX3CR1P49238 HSD17B1P1-201ENST00000590052 955 ntBASIC20.48■□□□□ 0.87
CX3CR1P49238 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.48■□□□□ 0.87
CX3CR1P49238 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CX3CR1P49238 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CX3CR1P49238 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CX3CR1P49238 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CX3CR1P49238 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CX3CR1P49238 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CX3CR1P49238 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.47■□□□□ 0.87
CX3CR1P49238 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CX3CR1P49238 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CX3CR1P49238 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CX3CR1P49238 AC018755.3-202ENST00000596210 929 ntBASIC20.47■□□□□ 0.87
CX3CR1P49238 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CX3CR1P49238 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CX3CR1P49238 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.47■□□□□ 0.87
CX3CR1P49238 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.47■□□□□ 0.87
CX3CR1P49238 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CX3CR1P49238 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CR1P49238 LINC00543-201ENST00000567234 1845 ntBASIC20.46■□□□□ 0.87
CX3CR1P49238 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CX3CR1P49238 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CX3CR1P49238 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CX3CR1P49238 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CX3CR1P49238 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CX3CR1P49238 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.44■□□□□ 0.86
CX3CR1P49238 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CX3CR1P49238 SPCS2P3-201ENST00000500401 656 ntBASIC20.44■□□□□ 0.86
CX3CR1P49238 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CX3CR1P49238 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CX3CR1P49238 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CX3CR1P49238 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms