Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SLC6A10P-202ENST00000431994 2058 ntBASIC19.07■□□□□ 0.64
CEACAM3P40198 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CEACAM3P40198 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CEACAM3P40198 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CEACAM3P40198 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CEACAM3P40198 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.07■□□□□ 0.64
CEACAM3P40198 MIR4508-201ENST00000584178 70 ntBASIC19.07■□□□□ 0.64
CEACAM3P40198 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CEACAM3P40198 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CEACAM3P40198 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CEACAM3P40198 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CEACAM3P40198 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.06■□□□□ 0.64
CEACAM3P40198 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CEACAM3P40198 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.06■□□□□ 0.64
CEACAM3P40198 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CEACAM3P40198 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.05■□□□□ 0.64
CEACAM3P40198 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CEACAM3P40198 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CEACAM3P40198 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEACAM3P40198 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CEACAM3P40198 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.05■□□□□ 0.64
CEACAM3P40198 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.05■□□□□ 0.64
CEACAM3P40198 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.05■□□□□ 0.64
CEACAM3P40198 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEACAM3P40198 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEACAM3P40198 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CEACAM3P40198 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEACAM3P40198 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEACAM3P40198 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEACAM3P40198 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEACAM3P40198 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CEACAM3P40198 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.04■□□□□ 0.64
CEACAM3P40198 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEACAM3P40198 AC011551.1-201ENST00000614101 683 ntBASIC19.04■□□□□ 0.64
CEACAM3P40198 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
CEACAM3P40198 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CEACAM3P40198 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEACAM3P40198 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CEACAM3P40198 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CEACAM3P40198 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.03■□□□□ 0.64
CEACAM3P40198 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEACAM3P40198 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.03■□□□□ 0.64
CEACAM3P40198 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEACAM3P40198 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CEACAM3P40198 PVT1_1.1-201ENST00000615125 194 ntBASIC19.03■□□□□ 0.64
CEACAM3P40198 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEACAM3P40198 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.03■□□□□ 0.64
CEACAM3P40198 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.03■□□□□ 0.64
CEACAM3P40198 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEACAM3P40198 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEACAM3P40198 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CEACAM3P40198 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.02■□□□□ 0.64
CEACAM3P40198 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CEACAM3P40198 KRT8P33-201ENST00000508125 1423 ntBASIC19.02■□□□□ 0.64
CEACAM3P40198 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CEACAM3P40198 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CEACAM3P40198 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CEACAM3P40198 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CEACAM3P40198 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CEACAM3P40198 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CEACAM3P40198 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.02■□□□□ 0.63
CEACAM3P40198 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CEACAM3P40198 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.63
CEACAM3P40198 AC020928.2-201ENST00000588717 2197 ntBASIC19.02■□□□□ 0.63
CEACAM3P40198 AC142381.3-201ENST00000568208 1670 ntBASIC19.01■□□□□ 0.63
CEACAM3P40198 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CEACAM3P40198 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CEACAM3P40198 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CEACAM3P40198 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CEACAM3P40198 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CEACAM3P40198 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.01■□□□□ 0.63
CEACAM3P40198 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CEACAM3P40198 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.01■□□□□ 0.63
CEACAM3P40198 THA1P-201ENST00000590384 1145 ntBASIC19.01■□□□□ 0.63
CEACAM3P40198 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CEACAM3P40198 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CEACAM3P40198 AC022211.4-201ENST00000625094 2161 ntBASIC19■□□□□ 0.63
CEACAM3P40198 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CEACAM3P40198 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CEACAM3P40198 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CEACAM3P40198 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19■□□□□ 0.63
CEACAM3P40198 MIR6089-201ENST00000616698 64 ntBASIC19■□□□□ 0.63
CEACAM3P40198 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19■□□□□ 0.63
CEACAM3P40198 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CEACAM3P40198 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CEACAM3P40198 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CEACAM3P40198 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19■□□□□ 0.63
CEACAM3P40198 AC090877.2-201ENST00000558441 1738 ntBASIC19■□□□□ 0.63
CEACAM3P40198 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19■□□□□ 0.63
CEACAM3P40198 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CEACAM3P40198 AP003733.4-201ENST00000623785 1697 ntBASIC18.99■□□□□ 0.63
CEACAM3P40198 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CEACAM3P40198 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CEACAM3P40198 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.99■□□□□ 0.63
CEACAM3P40198 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CEACAM3P40198 KRT18P24-201ENST00000344739 1156 ntBASIC18.99■□□□□ 0.63
CEACAM3P40198 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CEACAM3P40198 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.99■□□□□ 0.63
CEACAM3P40198 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
CEACAM3P40198 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms