Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
GDF1P27539 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GDF1P27539 AC137630.3-201ENST00000607245 391 ntBASIC21.33■■□□□ 1.01
GDF1P27539 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.33■■□□□ 1.01
GDF1P27539 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
GDF1P27539 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
GDF1P27539 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.32■■□□□ 1
GDF1P27539 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.32■■□□□ 1
GDF1P27539 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.32■■□□□ 1
GDF1P27539 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.32■■□□□ 1
GDF1P27539 MIR4787-201ENST00000607364 84 ntBASIC21.32■■□□□ 1
GDF1P27539 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.32■■□□□ 1
GDF1P27539 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GDF1P27539 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.32■■□□□ 1
GDF1P27539 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.32■■□□□ 1
GDF1P27539 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.32■■□□□ 1
GDF1P27539 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GDF1P27539 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
GDF1P27539 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.31■■□□□ 1
GDF1P27539 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.31■■□□□ 1
GDF1P27539 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.31■■□□□ 1
GDF1P27539 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.31■■□□□ 1
GDF1P27539 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.31■■□□□ 1
GDF1P27539 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GDF1P27539 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
GDF1P27539 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.3■■□□□ 1
GDF1P27539 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GDF1P27539 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.3■■□□□ 1
GDF1P27539 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GDF1P27539 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.29■■□□□ 1
GDF1P27539 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GDF1P27539 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
GDF1P27539 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
GDF1P27539 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GDF1P27539 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GDF1P27539 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.29■■□□□ 1
GDF1P27539 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.29■■□□□ 1
GDF1P27539 AC090877.2-201ENST00000558441 1738 ntBASIC21.29■■□□□ 1
GDF1P27539 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GDF1P27539 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.28■■□□□ 1
GDF1P27539 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.28■■□□□ 1
GDF1P27539 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.28■■□□□ 1
GDF1P27539 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
GDF1P27539 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.28■■□□□ 1
GDF1P27539 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.28■■□□□ 1
GDF1P27539 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.28■■□□□ 1
GDF1P27539 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.28■■□□□ 1
GDF1P27539 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.27■■□□□ 1
GDF1P27539 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GDF1P27539 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GDF1P27539 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
GDF1P27539 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
GDF1P27539 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.27■■□□□ 1
GDF1P27539 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.27■■□□□ 1
GDF1P27539 AC021242.3-201ENST00000607598 1377 ntBASIC21.26■□□□□ 0.99
GDF1P27539 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GDF1P27539 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.26■□□□□ 0.99
GDF1P27539 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GDF1P27539 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.26■□□□□ 0.99
GDF1P27539 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GDF1P27539 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF1P27539 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
GDF1P27539 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF1P27539 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF1P27539 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF1P27539 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
GDF1P27539 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.25■□□□□ 0.99
GDF1P27539 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF1P27539 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
GDF1P27539 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.24■□□□□ 0.99
GDF1P27539 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF1P27539 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GDF1P27539 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.24■□□□□ 0.99
GDF1P27539 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.24■□□□□ 0.99
GDF1P27539 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.23■□□□□ 0.99
GDF1P27539 TSPY9P-201ENST00000440215 945 ntBASIC21.23■□□□□ 0.99
GDF1P27539 TSPY11P-201ENST00000442607 1045 ntBASIC21.23■□□□□ 0.99
GDF1P27539 AL356441.2-201ENST00000443009 864 ntBASIC21.23■□□□□ 0.99
GDF1P27539 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.23■□□□□ 0.99
GDF1P27539 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GDF1P27539 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDF1P27539 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDF1P27539 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GDF1P27539 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GDF1P27539 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.22■□□□□ 0.99
GDF1P27539 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.22■□□□□ 0.99
GDF1P27539 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
GDF1P27539 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF1P27539 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF1P27539 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF1P27539 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF1P27539 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GDF1P27539 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GDF1P27539 SLC6A10P-202ENST00000431994 2058 ntBASIC21.21■□□□□ 0.99
GDF1P27539 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.21■□□□□ 0.99
GDF1P27539 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.21■□□□□ 0.99
GDF1P27539 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
GDF1P27539 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.21■□□□□ 0.99
GDF1P27539 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.21■□□□□ 0.99
GDF1P27539 AC131212.1-201ENST00000613771 668 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms