Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.31■□□□□ 0.84
ACKR3P25106 SPCS2P3-201ENST00000500401 656 ntBASIC20.31■□□□□ 0.84
ACKR3P25106 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ACKR3P25106 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.31■□□□□ 0.84
ACKR3P25106 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACKR3P25106 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ACKR3P25106 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.31■□□□□ 0.84
ACKR3P25106 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.31■□□□□ 0.84
ACKR3P25106 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACKR3P25106 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACKR3P25106 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACKR3P25106 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.3■□□□□ 0.84
ACKR3P25106 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.3■□□□□ 0.84
ACKR3P25106 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACKR3P25106 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACKR3P25106 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ACKR3P25106 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACKR3P25106 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACKR3P25106 LINC01124-201ENST00000409786 2117 ntBASIC20.29■□□□□ 0.84
ACKR3P25106 MIR6089-201ENST00000616698 64 ntBASIC20.29■□□□□ 0.84
ACKR3P25106 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACKR3P25106 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACKR3P25106 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACKR3P25106 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ACKR3P25106 FOXO3B-201ENST00000395675 1928 ntBASIC20.28■□□□□ 0.84
ACKR3P25106 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACKR3P25106 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.28■□□□□ 0.84
ACKR3P25106 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACKR3P25106 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.28■□□□□ 0.84
ACKR3P25106 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ACKR3P25106 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACKR3P25106 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACKR3P25106 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACKR3P25106 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACKR3P25106 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.27■□□□□ 0.84
ACKR3P25106 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ACKR3P25106 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ACKR3P25106 U85056.1-201ENST00000616429 682 ntBASIC20.27■□□□□ 0.84
ACKR3P25106 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.27■□□□□ 0.83
ACKR3P25106 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACKR3P25106 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ACKR3P25106 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACKR3P25106 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.26■□□□□ 0.83
ACKR3P25106 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACKR3P25106 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACKR3P25106 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACKR3P25106 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
ACKR3P25106 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACKR3P25106 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.26■□□□□ 0.83
ACKR3P25106 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.25■□□□□ 0.83
ACKR3P25106 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACKR3P25106 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACKR3P25106 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.25■□□□□ 0.83
ACKR3P25106 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACKR3P25106 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACKR3P25106 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.24■□□□□ 0.83
ACKR3P25106 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.24■□□□□ 0.83
ACKR3P25106 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.24■□□□□ 0.83
ACKR3P25106 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACKR3P25106 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.24■□□□□ 0.83
ACKR3P25106 DUX4L9-201ENST00000449051 1259 ntBASIC20.24■□□□□ 0.83
ACKR3P25106 AC018755.3-202ENST00000596210 929 ntBASIC20.24■□□□□ 0.83
ACKR3P25106 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACKR3P25106 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.24■□□□□ 0.83
ACKR3P25106 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ACKR3P25106 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ACKR3P25106 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.24■□□□□ 0.83
ACKR3P25106 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.24■□□□□ 0.83
ACKR3P25106 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.24■□□□□ 0.83
ACKR3P25106 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.24■□□□□ 0.83
ACKR3P25106 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACKR3P25106 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACKR3P25106 RPS2P7-201ENST00000447334 885 ntBASIC20.23■□□□□ 0.83
ACKR3P25106 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ACKR3P25106 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.23■□□□□ 0.83
ACKR3P25106 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.23■□□□□ 0.83
ACKR3P25106 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACKR3P25106 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ACKR3P25106 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACKR3P25106 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACKR3P25106 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACKR3P25106 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.22■□□□□ 0.83
ACKR3P25106 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.22■□□□□ 0.83
ACKR3P25106 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACKR3P25106 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACKR3P25106 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.22■□□□□ 0.83
ACKR3P25106 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ACKR3P25106 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ACKR3P25106 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.22■□□□□ 0.83
ACKR3P25106 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACKR3P25106 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ACKR3P25106 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.21■□□□□ 0.83
ACKR3P25106 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.21■□□□□ 0.83
ACKR3P25106 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.21■□□□□ 0.83
ACKR3P25106 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACKR3P25106 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACKR3P25106 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.21■□□□□ 0.83
ACKR3P25106 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACKR3P25106 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ACKR3P25106 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms