Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSR1P21757 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSR1P21757 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.68■□□□□ 0.9
MSR1P21757 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSR1P21757 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.68■□□□□ 0.9
MSR1P21757 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSR1P21757 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSR1P21757 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.68■□□□□ 0.9
MSR1P21757 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSR1P21757 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSR1P21757 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSR1P21757 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.67■□□□□ 0.9
MSR1P21757 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.67■□□□□ 0.9
MSR1P21757 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.67■□□□□ 0.9
MSR1P21757 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSR1P21757 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSR1P21757 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSR1P21757 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.67■□□□□ 0.9
MSR1P21757 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSR1P21757 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSR1P21757 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.66■□□□□ 0.9
MSR1P21757 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSR1P21757 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.66■□□□□ 0.9
MSR1P21757 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MSR1P21757 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.66■□□□□ 0.9
MSR1P21757 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSR1P21757 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSR1P21757 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSR1P21757 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MSR1P21757 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSR1P21757 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.65■□□□□ 0.9
MSR1P21757 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSR1P21757 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSR1P21757 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MSR1P21757 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSR1P21757 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSR1P21757 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSR1P21757 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSR1P21757 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSR1P21757 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSR1P21757 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.64■□□□□ 0.89
MSR1P21757 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSR1P21757 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSR1P21757 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSR1P21757 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSR1P21757 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSR1P21757 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
MSR1P21757 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSR1P21757 DUX4L18-201ENST00000553347 1267 ntBASIC20.63■□□□□ 0.89
MSR1P21757 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.63■□□□□ 0.89
MSR1P21757 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSR1P21757 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.62■□□□□ 0.89
MSR1P21757 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.62■□□□□ 0.89
MSR1P21757 AL592295.1-201ENST00000400984 884 ntBASIC20.62■□□□□ 0.89
MSR1P21757 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.62■□□□□ 0.89
MSR1P21757 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSR1P21757 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MSR1P21757 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSR1P21757 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSR1P21757 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSR1P21757 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.62■□□□□ 0.89
MSR1P21757 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.62■□□□□ 0.89
MSR1P21757 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MSR1P21757 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 LONRF2P2-201ENST00000439212 571 ntBASIC20.61■□□□□ 0.89
MSR1P21757 AC139795.1-202ENST00000500444 432 ntBASIC20.61■□□□□ 0.89
MSR1P21757 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MSR1P21757 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSR1P21757 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
MSR1P21757 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSR1P21757 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MSR1P21757 AC093323.1-202ENST00000635031 2045 ntBASIC20.6■□□□□ 0.89
MSR1P21757 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.6■□□□□ 0.89
MSR1P21757 ATP5G2P3-201ENST00000429083 425 ntBASIC20.6■□□□□ 0.89
MSR1P21757 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.6■□□□□ 0.89
MSR1P21757 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.6■□□□□ 0.89
MSR1P21757 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MSR1P21757 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MSR1P21757 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MSR1P21757 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MSR1P21757 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSR1P21757 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSR1P21757 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSR1P21757 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
MSR1P21757 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSR1P21757 AC004987.1-201ENST00000428627 508 ntBASIC20.59■□□□□ 0.89
MSR1P21757 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.59■□□□□ 0.89
MSR1P21757 LINC01124-201ENST00000409786 2117 ntBASIC20.59■□□□□ 0.89
MSR1P21757 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
MSR1P21757 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms