Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.71■□□□□ 0.75
CXCL3P19876 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CXCL3P19876 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CXCL3P19876 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.71■□□□□ 0.75
CXCL3P19876 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.71■□□□□ 0.75
CXCL3P19876 AC137767.1-201ENST00000602918 1920 ntBASIC19.71■□□□□ 0.75
CXCL3P19876 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CXCL3P19876 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CXCL3P19876 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CXCL3P19876 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.71■□□□□ 0.75
CXCL3P19876 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
CXCL3P19876 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL3P19876 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.7■□□□□ 0.74
CXCL3P19876 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CXCL3P19876 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL3P19876 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL3P19876 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL3P19876 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCL3P19876 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.7■□□□□ 0.74
CXCL3P19876 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.7■□□□□ 0.74
CXCL3P19876 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.69■□□□□ 0.74
CXCL3P19876 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.69■□□□□ 0.74
CXCL3P19876 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CXCL3P19876 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 AL391121.1-201ENST00000607967 1349 ntBASIC19.69■□□□□ 0.74
CXCL3P19876 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCL3P19876 LINC00526-201ENST00000581067 1875 ntBASIC19.69■□□□□ 0.74
CXCL3P19876 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CXCL3P19876 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCL3P19876 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.68■□□□□ 0.74
CXCL3P19876 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCL3P19876 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.68■□□□□ 0.74
CXCL3P19876 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCL3P19876 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CXCL3P19876 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL3P19876 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.67■□□□□ 0.74
CXCL3P19876 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.67■□□□□ 0.74
CXCL3P19876 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL3P19876 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.67■□□□□ 0.74
CXCL3P19876 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.67■□□□□ 0.74
CXCL3P19876 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.67■□□□□ 0.74
CXCL3P19876 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL3P19876 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL3P19876 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL3P19876 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL3P19876 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL3P19876 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CXCL3P19876 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CXCL3P19876 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CXCL3P19876 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CXCL3P19876 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL3P19876 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.66■□□□□ 0.74
CXCL3P19876 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL3P19876 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.66■□□□□ 0.74
CXCL3P19876 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL3P19876 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.66■□□□□ 0.74
CXCL3P19876 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.66■□□□□ 0.74
CXCL3P19876 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL3P19876 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CXCL3P19876 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL3P19876 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL3P19876 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL3P19876 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL3P19876 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CXCL3P19876 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL3P19876 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CXCL3P19876 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.65■□□□□ 0.74
CXCL3P19876 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL3P19876 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL3P19876 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CXCL3P19876 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CXCL3P19876 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CXCL3P19876 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CXCL3P19876 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CXCL3P19876 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CXCL3P19876 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CXCL3P19876 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CXCL3P19876 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.64■□□□□ 0.73
CXCL3P19876 CAHM-201ENST00000604200 896 ntBASIC19.64■□□□□ 0.73
CXCL3P19876 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CXCL3P19876 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL3P19876 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL3P19876 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL3P19876 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CXCL3P19876 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CXCL3P19876 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CXCL3P19876 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CXCL3P19876 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL3P19876 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL3P19876 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CXCL3P19876 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CXCL3P19876 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL3P19876 AC136428.2-201ENST00000563187 214 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms