Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC29.33■■■□□ 2.29
COL11A2P13942 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL11A2P13942 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL11A2P13942 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL11A2P13942 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.32■■■□□ 2.28
COL11A2P13942 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC29.32■■■□□ 2.28
COL11A2P13942 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.31■■■□□ 2.28
COL11A2P13942 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
COL11A2P13942 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC29.31■■■□□ 2.28
COL11A2P13942 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.31■■■□□ 2.28
COL11A2P13942 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
COL11A2P13942 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
COL11A2P13942 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
COL11A2P13942 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
COL11A2P13942 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC29.29■■■□□ 2.28
COL11A2P13942 AL136162.1-201ENST00000607711 1078 ntBASIC29.29■■■□□ 2.28
COL11A2P13942 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
COL11A2P13942 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
COL11A2P13942 UNC93B3-201ENST00000308076 687 ntBASIC29.28■■■□□ 2.28
COL11A2P13942 AC092666.2-201ENST00000613287 246 ntBASIC29.28■■■□□ 2.28
COL11A2P13942 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL11A2P13942 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
COL11A2P13942 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL11A2P13942 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL11A2P13942 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
COL11A2P13942 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.28■■■□□ 2.28
COL11A2P13942 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC29.28■■■□□ 2.28
COL11A2P13942 AC024257.2-201ENST00000549699 147 ntBASIC29.28■■■□□ 2.28
COL11A2P13942 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.28■■■□□ 2.28
COL11A2P13942 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.28■■■□□ 2.28
COL11A2P13942 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
COL11A2P13942 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
COL11A2P13942 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC29.27■■■□□ 2.28
COL11A2P13942 AC105265.2-201ENST00000467189 838 ntBASIC29.27■■■□□ 2.28
COL11A2P13942 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.27■■■□□ 2.28
COL11A2P13942 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.26■■■□□ 2.28
COL11A2P13942 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL11A2P13942 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL11A2P13942 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC29.26■■■□□ 2.27
COL11A2P13942 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
COL11A2P13942 FOXO3B-201ENST00000395675 1928 ntBASIC29.26■■■□□ 2.27
COL11A2P13942 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
COL11A2P13942 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL11A2P13942 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL11A2P13942 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL11A2P13942 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
COL11A2P13942 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
COL11A2P13942 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
COL11A2P13942 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL11A2P13942 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL11A2P13942 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.25■■■□□ 2.27
COL11A2P13942 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.25■■■□□ 2.27
COL11A2P13942 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.24■■■□□ 2.27
COL11A2P13942 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.24■■■□□ 2.27
COL11A2P13942 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.24■■■□□ 2.27
COL11A2P13942 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL11A2P13942 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
COL11A2P13942 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL11A2P13942 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.23■■■□□ 2.27
COL11A2P13942 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL11A2P13942 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL11A2P13942 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
COL11A2P13942 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.22■■■□□ 2.27
COL11A2P13942 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL11A2P13942 AP001330.3-201ENST00000520123 633 ntBASIC29.22■■■□□ 2.27
COL11A2P13942 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL11A2P13942 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL11A2P13942 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL11A2P13942 EDA-201ENST00000338901 1233 ntBASIC29.2■■■□□ 2.26
COL11A2P13942 AF213884.3-201ENST00000563833 479 ntBASIC29.2■■■□□ 2.26
COL11A2P13942 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC29.2■■■□□ 2.26
COL11A2P13942 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL11A2P13942 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
COL11A2P13942 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL11A2P13942 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL11A2P13942 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29.18■■■□□ 2.26
COL11A2P13942 MIR5787-201ENST00000611784 55 ntBASIC29.18■■■□□ 2.26
COL11A2P13942 MIR6722-201ENST00000617286 78 ntBASIC29.18■■■□□ 2.26
COL11A2P13942 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.18■■■□□ 2.26
COL11A2P13942 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC29.18■■■□□ 2.26
COL11A2P13942 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
COL11A2P13942 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29.17■■■□□ 2.26
COL11A2P13942 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.17■■■□□ 2.26
COL11A2P13942 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
COL11A2P13942 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
COL11A2P13942 MIR939-201ENST00000401314 82 ntBASIC29.17■■■□□ 2.26
COL11A2P13942 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL11A2P13942 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL11A2P13942 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
COL11A2P13942 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
COL11A2P13942 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
COL11A2P13942 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
COL11A2P13942 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
COL11A2P13942 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
COL11A2P13942 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
COL11A2P13942 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL11A2P13942 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.14■■■□□ 2.26
COL11A2P13942 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.14■■■□□ 2.26
COL11A2P13942 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL11A2P13942 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms