Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
SNRPA1P09661 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.26■■■□□ 2.44
SNRPA1P09661 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
SNRPA1P09661 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SNRPA1P09661 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
SNRPA1P09661 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SNRPA1P09661 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.26■■■□□ 2.43
SNRPA1P09661 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
SNRPA1P09661 AL121749.1-202ENST00000609313 2153 ntBASIC30.26■■■□□ 2.43
SNRPA1P09661 MIR6724-1-201ENST00000616420 92 ntBASIC30.26■■■□□ 2.43
SNRPA1P09661 MIR6724-2-201ENST00000616483 92 ntBASIC30.26■■■□□ 2.43
SNRPA1P09661 MIR6724-4-201ENST00000617390 92 ntBASIC30.26■■■□□ 2.43
SNRPA1P09661 MIR6724-3-201ENST00000622482 92 ntBASIC30.26■■■□□ 2.43
SNRPA1P09661 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
SNRPA1P09661 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.25■■■□□ 2.43
SNRPA1P09661 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SNRPA1P09661 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
SNRPA1P09661 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SNRPA1P09661 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNRPA1P09661 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SNRPA1P09661 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNRPA1P09661 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNRPA1P09661 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNRPA1P09661 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.24■■■□□ 2.43
SNRPA1P09661 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.24■■■□□ 2.43
SNRPA1P09661 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.24■■■□□ 2.43
SNRPA1P09661 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.24■■■□□ 2.43
SNRPA1P09661 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.24■■■□□ 2.43
SNRPA1P09661 AL117332.1-201ENST00000622628 974 ntBASIC30.24■■■□□ 2.43
SNRPA1P09661 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNRPA1P09661 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SNRPA1P09661 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.23■■■□□ 2.43
SNRPA1P09661 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.23■■■□□ 2.43
SNRPA1P09661 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.23■■■□□ 2.43
SNRPA1P09661 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.23■■■□□ 2.43
SNRPA1P09661 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.22■■■□□ 2.43
SNRPA1P09661 AC131281.2-201ENST00000520478 145 ntBASIC30.22■■■□□ 2.43
SNRPA1P09661 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.22■■■□□ 2.43
SNRPA1P09661 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.22■■■□□ 2.43
SNRPA1P09661 MIR3621-201ENST00000580529 85 ntBASIC30.22■■■□□ 2.43
SNRPA1P09661 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNRPA1P09661 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNRPA1P09661 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SNRPA1P09661 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
SNRPA1P09661 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SNRPA1P09661 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SNRPA1P09661 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNRPA1P09661 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SNRPA1P09661 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SNRPA1P09661 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.43
SNRPA1P09661 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SNRPA1P09661 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.2■■■□□ 2.42
SNRPA1P09661 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
SNRPA1P09661 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
SNRPA1P09661 AC092803.2-201ENST00000564287 1899 ntBASIC30.19■■■□□ 2.42
SNRPA1P09661 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNRPA1P09661 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNRPA1P09661 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SNRPA1P09661 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.18■■■□□ 2.42
SNRPA1P09661 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.18■■■□□ 2.42
SNRPA1P09661 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SNRPA1P09661 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SNRPA1P09661 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
SNRPA1P09661 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNRPA1P09661 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SNRPA1P09661 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
SNRPA1P09661 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNRPA1P09661 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.17■■■□□ 2.42
SNRPA1P09661 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNRPA1P09661 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.16■■■□□ 2.42
SNRPA1P09661 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.16■■■□□ 2.42
SNRPA1P09661 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SNRPA1P09661 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
SNRPA1P09661 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNRPA1P09661 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
SNRPA1P09661 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.15■■■□□ 2.42
SNRPA1P09661 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNRPA1P09661 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.15■■■□□ 2.42
SNRPA1P09661 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.14■■■□□ 2.42
SNRPA1P09661 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SNRPA1P09661 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNRPA1P09661 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.14■■■□□ 2.42
SNRPA1P09661 AL356740.2-201ENST00000601559 647 ntBASIC30.14■■■□□ 2.42
SNRPA1P09661 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.14■■■□□ 2.42
SNRPA1P09661 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.14■■■□□ 2.41
SNRPA1P09661 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SNRPA1P09661 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SNRPA1P09661 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SNRPA1P09661 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
SNRPA1P09661 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNRPA1P09661 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
SNRPA1P09661 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.12■■■□□ 2.41
SNRPA1P09661 SNX5-217ENST00000606557 1087 ntBASIC30.12■■■□□ 2.41
SNRPA1P09661 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNRPA1P09661 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNRPA1P09661 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SNRPA1P09661 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.11■■■□□ 2.41
SNRPA1P09661 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SNRPA1P09661 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.11■■■□□ 2.41
SNRPA1P09661 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms