Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
OPN1SWP03999 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
OPN1SWP03999 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.87■■□□□ 1.09
OPN1SWP03999 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
OPN1SWP03999 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.87■■□□□ 1.09
OPN1SWP03999 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.87■■□□□ 1.09
OPN1SWP03999 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
OPN1SWP03999 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
OPN1SWP03999 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
OPN1SWP03999 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.86■■□□□ 1.09
OPN1SWP03999 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
OPN1SWP03999 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
OPN1SWP03999 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.86■■□□□ 1.09
OPN1SWP03999 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
OPN1SWP03999 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
OPN1SWP03999 AC004812.2-201ENST00000611079 2094 ntBASIC21.85■■□□□ 1.09
OPN1SWP03999 MIR6089-201ENST00000616698 64 ntBASIC21.85■■□□□ 1.09
OPN1SWP03999 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.85■■□□□ 1.09
OPN1SWP03999 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
OPN1SWP03999 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.84■■□□□ 1.09
OPN1SWP03999 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.84■■□□□ 1.09
OPN1SWP03999 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.84■■□□□ 1.09
OPN1SWP03999 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.84■■□□□ 1.09
OPN1SWP03999 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.84■■□□□ 1.09
OPN1SWP03999 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
OPN1SWP03999 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.84■■□□□ 1.09
OPN1SWP03999 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1SWP03999 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
OPN1SWP03999 AC141586.4-201ENST00000624558 1573 ntBASIC21.83■■□□□ 1.09
OPN1SWP03999 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
OPN1SWP03999 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
OPN1SWP03999 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.83■■□□□ 1.09
OPN1SWP03999 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
OPN1SWP03999 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
OPN1SWP03999 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
OPN1SWP03999 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
OPN1SWP03999 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
OPN1SWP03999 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
OPN1SWP03999 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.83■■□□□ 1.08
OPN1SWP03999 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
OPN1SWP03999 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.82■■□□□ 1.08
OPN1SWP03999 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.82■■□□□ 1.08
OPN1SWP03999 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.82■■□□□ 1.08
OPN1SWP03999 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.82■■□□□ 1.08
OPN1SWP03999 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.82■■□□□ 1.08
OPN1SWP03999 AC007029.1-201ENST00000604183 313 ntBASIC21.82■■□□□ 1.08
OPN1SWP03999 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
OPN1SWP03999 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
OPN1SWP03999 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
OPN1SWP03999 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
OPN1SWP03999 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.81■■□□□ 1.08
OPN1SWP03999 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.81■■□□□ 1.08
OPN1SWP03999 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
OPN1SWP03999 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
OPN1SWP03999 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.81■■□□□ 1.08
OPN1SWP03999 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
OPN1SWP03999 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
OPN1SWP03999 ABCB10P4-201ENST00000566803 2184 ntBASIC21.81■■□□□ 1.08
OPN1SWP03999 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
OPN1SWP03999 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
OPN1SWP03999 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
OPN1SWP03999 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
OPN1SWP03999 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.8■■□□□ 1.08
OPN1SWP03999 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
OPN1SWP03999 AC133561.1-201ENST00000568600 2415 ntBASIC21.79■■□□□ 1.08
OPN1SWP03999 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
OPN1SWP03999 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
OPN1SWP03999 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.79■■□□□ 1.08
OPN1SWP03999 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
OPN1SWP03999 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
OPN1SWP03999 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
OPN1SWP03999 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
OPN1SWP03999 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
OPN1SWP03999 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
OPN1SWP03999 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
OPN1SWP03999 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
OPN1SWP03999 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.78■■□□□ 1.08
OPN1SWP03999 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
OPN1SWP03999 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
OPN1SWP03999 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
OPN1SWP03999 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
OPN1SWP03999 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
OPN1SWP03999 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
OPN1SWP03999 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
OPN1SWP03999 HLA-L-211ENST00000482052 1765 ntBASIC21.77■■□□□ 1.08
OPN1SWP03999 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
OPN1SWP03999 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
OPN1SWP03999 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
OPN1SWP03999 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
OPN1SWP03999 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.76■■□□□ 1.07
OPN1SWP03999 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
OPN1SWP03999 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms