Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND4P03905 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND4P03905 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND4P03905 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.3■□□□□ 0.84
MT-ND4P03905 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND4P03905 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.3■□□□□ 0.84
MT-ND4P03905 C9orf163-202ENST00000624034 2573 ntBASIC20.3■□□□□ 0.84
MT-ND4P03905 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND4P03905 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.3■□□□□ 0.84
MT-ND4P03905 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MT-ND4P03905 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
MT-ND4P03905 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MT-ND4P03905 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND4P03905 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND4P03905 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND4P03905 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND4P03905 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MT-ND4P03905 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND4P03905 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND4P03905 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
MT-ND4P03905 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MT-ND4P03905 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND4P03905 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
MT-ND4P03905 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND4P03905 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND4P03905 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.27■□□□□ 0.84
MT-ND4P03905 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND4P03905 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND4P03905 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND4P03905 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-ND4P03905 AC126177.7-201ENST00000547904 679 ntBASIC20.27■□□□□ 0.84
MT-ND4P03905 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MT-ND4P03905 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND4P03905 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND4P03905 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND4P03905 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.26■□□□□ 0.83
MT-ND4P03905 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
MT-ND4P03905 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND4P03905 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MT-ND4P03905 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND4P03905 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND4P03905 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND4P03905 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND4P03905 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND4P03905 AC141586.4-201ENST00000624558 1573 ntBASIC20.25■□□□□ 0.83
MT-ND4P03905 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND4P03905 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.25■□□□□ 0.83
MT-ND4P03905 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.25■□□□□ 0.83
MT-ND4P03905 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
MT-ND4P03905 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND4P03905 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND4P03905 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND4P03905 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND4P03905 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
MT-ND4P03905 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND4P03905 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MT-ND4P03905 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-ND4P03905 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND4P03905 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-ND4P03905 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND4P03905 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MT-ND4P03905 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND4P03905 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND4P03905 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MT-ND4P03905 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND4P03905 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND4P03905 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND4P03905 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND4P03905 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
MT-ND4P03905 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND4P03905 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND4P03905 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND4P03905 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND4P03905 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND4P03905 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND4P03905 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.22■□□□□ 0.83
MT-ND4P03905 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
MT-ND4P03905 SLC6A10P-202ENST00000431994 2058 ntBASIC20.22■□□□□ 0.83
MT-ND4P03905 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND4P03905 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND4P03905 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND4P03905 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND4P03905 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MT-ND4P03905 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND4P03905 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND4P03905 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND4P03905 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND4P03905 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND4P03905 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.21■□□□□ 0.83
MT-ND4P03905 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.21■□□□□ 0.83
MT-ND4P03905 MIR7108-201ENST00000614319 87 ntBASIC20.21■□□□□ 0.83
MT-ND4P03905 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.21■□□□□ 0.83
MT-ND4P03905 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND4P03905 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND4P03905 AC004812.2-201ENST00000611079 2094 ntBASIC20.2■□□□□ 0.82
MT-ND4P03905 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND4P03905 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND4P03905 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND4P03905 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MT-ND4P03905 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms