Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CD4P01730 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CD4P01730 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.17■■□□□ 1.78
CD4P01730 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CD4P01730 AC106739.1-201ENST00000617035 715 ntBASIC26.16■■□□□ 1.78
CD4P01730 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CD4P01730 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CD4P01730 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CD4P01730 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
CD4P01730 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CD4P01730 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CD4P01730 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CD4P01730 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.15■■□□□ 1.78
CD4P01730 ZNRF2P3-201ENST00000424200 374 ntBASIC26.15■■□□□ 1.78
CD4P01730 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CD4P01730 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CD4P01730 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CD4P01730 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CD4P01730 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CD4P01730 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.14■■□□□ 1.78
CD4P01730 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.14■■□□□ 1.78
CD4P01730 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CD4P01730 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CD4P01730 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
CD4P01730 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CD4P01730 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CD4P01730 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.13■■□□□ 1.77
CD4P01730 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CD4P01730 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CD4P01730 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.13■■□□□ 1.77
CD4P01730 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CD4P01730 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.13■■□□□ 1.77
CD4P01730 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CD4P01730 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CD4P01730 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CD4P01730 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CD4P01730 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.12■■□□□ 1.77
CD4P01730 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.12■■□□□ 1.77
CD4P01730 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CD4P01730 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.12■■□□□ 1.77
CD4P01730 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.12■■□□□ 1.77
CD4P01730 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CD4P01730 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.12■■□□□ 1.77
CD4P01730 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
CD4P01730 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.1■■□□□ 1.77
CD4P01730 PBX2P1-201ENST00000493219 1291 ntBASIC26.1■■□□□ 1.77
CD4P01730 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.1■■□□□ 1.77
CD4P01730 RARRES2P6-201ENST00000567333 442 ntBASIC26.1■■□□□ 1.77
CD4P01730 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.1■■□□□ 1.77
CD4P01730 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CD4P01730 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.09■■□□□ 1.77
CD4P01730 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.09■■□□□ 1.77
CD4P01730 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CD4P01730 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CD4P01730 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CD4P01730 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CD4P01730 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CD4P01730 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CD4P01730 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.08■■□□□ 1.77
CD4P01730 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.08■■□□□ 1.76
CD4P01730 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CD4P01730 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CD4P01730 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CD4P01730 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.07■■□□□ 1.76
CD4P01730 AL031432.3-201ENST00000607698 485 ntBASIC26.07■■□□□ 1.76
CD4P01730 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CD4P01730 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
CD4P01730 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CD4P01730 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
CD4P01730 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CD4P01730 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.06■■□□□ 1.76
CD4P01730 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.06■■□□□ 1.76
CD4P01730 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.06■■□□□ 1.76
CD4P01730 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CD4P01730 AC142381.2-201ENST00000566120 298 ntBASIC26.06■■□□□ 1.76
CD4P01730 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.06■■□□□ 1.76
CD4P01730 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CD4P01730 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CD4P01730 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.05■■□□□ 1.76
CD4P01730 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.05■■□□□ 1.76
CD4P01730 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CD4P01730 SUDS3P1-201ENST00000505831 966 ntBASIC26.05■■□□□ 1.76
CD4P01730 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.05■■□□□ 1.76
CD4P01730 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.05■■□□□ 1.76
CD4P01730 SNX5-217ENST00000606557 1087 ntBASIC26.05■■□□□ 1.76
CD4P01730 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CD4P01730 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CD4P01730 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CD4P01730 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CD4P01730 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CD4P01730 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CD4P01730 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CD4P01730 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CD4P01730 AC026271.2-201ENST00000428091 497 ntBASIC26.04■■□□□ 1.76
CD4P01730 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CD4P01730 MIR6722-201ENST00000617286 78 ntBASIC26.04■■□□□ 1.76
CD4P01730 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.04■■□□□ 1.76
CD4P01730 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CD4P01730 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
CD4P01730 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms