Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOMM40O96008 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TOMM40O96008 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOMM40O96008 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOMM40O96008 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOMM40O96008 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.29■□□□□ 0.52
TOMM40O96008 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.29■□□□□ 0.52
TOMM40O96008 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.29■□□□□ 0.52
TOMM40O96008 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOMM40O96008 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOMM40O96008 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOMM40O96008 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TOMM40O96008 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.29■□□□□ 0.52
TOMM40O96008 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TOMM40O96008 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOMM40O96008 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOMM40O96008 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TOMM40O96008 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOMM40O96008 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.28■□□□□ 0.52
TOMM40O96008 MIR6089-201ENST00000616698 64 ntBASIC18.28■□□□□ 0.52
TOMM40O96008 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOMM40O96008 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TOMM40O96008 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.27■□□□□ 0.52
TOMM40O96008 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.27■□□□□ 0.52
TOMM40O96008 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TOMM40O96008 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TOMM40O96008 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TOMM40O96008 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
TOMM40O96008 AC141586.4-201ENST00000624558 1573 ntBASIC18.27■□□□□ 0.52
TOMM40O96008 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.27■□□□□ 0.52
TOMM40O96008 KRT18P10-201ENST00000388836 1287 ntBASIC18.27■□□□□ 0.52
TOMM40O96008 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TOMM40O96008 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TOMM40O96008 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
TOMM40O96008 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TOMM40O96008 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TOMM40O96008 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOMM40O96008 AC079834.2-201ENST00000609776 1949 ntBASIC18.26■□□□□ 0.51
TOMM40O96008 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.26■□□□□ 0.51
TOMM40O96008 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
TOMM40O96008 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TOMM40O96008 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOMM40O96008 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOMM40O96008 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOMM40O96008 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOMM40O96008 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TOMM40O96008 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.26■□□□□ 0.51
TOMM40O96008 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TOMM40O96008 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TOMM40O96008 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.26■□□□□ 0.51
TOMM40O96008 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOMM40O96008 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TOMM40O96008 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.25■□□□□ 0.51
TOMM40O96008 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
TOMM40O96008 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOMM40O96008 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TOMM40O96008 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TOMM40O96008 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TOMM40O96008 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOMM40O96008 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TOMM40O96008 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOMM40O96008 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOMM40O96008 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TOMM40O96008 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOMM40O96008 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TOMM40O96008 MIR4449-201ENST00000578365 66 ntBASIC18.24■□□□□ 0.51
TOMM40O96008 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.24■□□□□ 0.51
TOMM40O96008 RAP2CP1-202ENST00000605179 643 ntBASIC18.24■□□□□ 0.51
TOMM40O96008 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOMM40O96008 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.23■□□□□ 0.51
TOMM40O96008 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOMM40O96008 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOMM40O96008 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOMM40O96008 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.23■□□□□ 0.51
TOMM40O96008 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOMM40O96008 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TOMM40O96008 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOMM40O96008 GPX1-201ENST00000419349 1106 ntBASIC18.23■□□□□ 0.51
TOMM40O96008 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.23■□□□□ 0.51
TOMM40O96008 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOMM40O96008 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.22■□□□□ 0.51
TOMM40O96008 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOMM40O96008 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.22■□□□□ 0.51
TOMM40O96008 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.22■□□□□ 0.51
TOMM40O96008 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOMM40O96008 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOMM40O96008 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOMM40O96008 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TOMM40O96008 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOMM40O96008 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOMM40O96008 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOMM40O96008 AC026202.3-201ENST00000600805 1127 ntBASIC18.21■□□□□ 0.51
TOMM40O96008 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TOMM40O96008 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.21■□□□□ 0.51
TOMM40O96008 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOMM40O96008 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.2■□□□□ 0.5
TOMM40O96008 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TOMM40O96008 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOMM40O96008 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.2■□□□□ 0.5
TOMM40O96008 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms