Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB3DO95716 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3DO95716 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
RAB3DO95716 C9orf163-202ENST00000624034 2573 ntBASIC19.87■□□□□ 0.77
RAB3DO95716 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB3DO95716 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3DO95716 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB3DO95716 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3DO95716 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB3DO95716 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3DO95716 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3DO95716 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB3DO95716 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3DO95716 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3DO95716 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RAB3DO95716 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3DO95716 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RAB3DO95716 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.86■□□□□ 0.77
RAB3DO95716 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB3DO95716 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB3DO95716 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3DO95716 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB3DO95716 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAB3DO95716 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3DO95716 AC044849.2-201ENST00000606596 710 ntBASIC19.85■□□□□ 0.77
RAB3DO95716 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RAB3DO95716 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3DO95716 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3DO95716 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3DO95716 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB3DO95716 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3DO95716 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAB3DO95716 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3DO95716 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RAB3DO95716 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3DO95716 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB3DO95716 AC008813.1-201ENST00000536597 885 ntBASIC19.84■□□□□ 0.77
RAB3DO95716 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB3DO95716 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3DO95716 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB3DO95716 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB3DO95716 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB3DO95716 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB3DO95716 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RAB3DO95716 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.83■□□□□ 0.77
RAB3DO95716 AC148477.6-201ENST00000623746 465 ntBASIC19.83■□□□□ 0.77
RAB3DO95716 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB3DO95716 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RAB3DO95716 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RAB3DO95716 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RAB3DO95716 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3DO95716 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3DO95716 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RAB3DO95716 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RAB3DO95716 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3DO95716 DUX4L29-201ENST00000425409 679 ntBASIC19.81■□□□□ 0.76
RAB3DO95716 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3DO95716 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3DO95716 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3DO95716 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3DO95716 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3DO95716 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3DO95716 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3DO95716 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3DO95716 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3DO95716 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RAB3DO95716 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3DO95716 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3DO95716 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3DO95716 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RAB3DO95716 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3DO95716 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3DO95716 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3DO95716 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3DO95716 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3DO95716 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3DO95716 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3DO95716 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3DO95716 MIR6089-201ENST00000616698 64 ntBASIC19.78■□□□□ 0.76
RAB3DO95716 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB3DO95716 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB3DO95716 AL117328.2-201ENST00000624617 1940 ntBASIC19.78■□□□□ 0.76
RAB3DO95716 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3DO95716 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAB3DO95716 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3DO95716 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3DO95716 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB3DO95716 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3DO95716 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3DO95716 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RAB3DO95716 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3DO95716 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.77■□□□□ 0.75
RAB3DO95716 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RAB3DO95716 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3DO95716 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3DO95716 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3DO95716 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB3DO95716 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3DO95716 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB3DO95716 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms