Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.79■□□□□ 0.76
PDCD6O75340 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDCD6O75340 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.79■□□□□ 0.76
PDCD6O75340 KRT18P10-201ENST00000388836 1287 ntBASIC19.79■□□□□ 0.76
PDCD6O75340 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PDCD6O75340 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.79■□□□□ 0.76
PDCD6O75340 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.79■□□□□ 0.76
PDCD6O75340 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.79■□□□□ 0.76
PDCD6O75340 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDCD6O75340 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PDCD6O75340 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD6O75340 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD6O75340 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD6O75340 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD6O75340 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
PDCD6O75340 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.78■□□□□ 0.76
PDCD6O75340 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD6O75340 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD6O75340 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDCD6O75340 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.78■□□□□ 0.76
PDCD6O75340 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD6O75340 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDCD6O75340 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.77■□□□□ 0.76
PDCD6O75340 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD6O75340 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD6O75340 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD6O75340 RAP2CP1-202ENST00000605179 643 ntBASIC19.76■□□□□ 0.75
PDCD6O75340 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD6O75340 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD6O75340 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDCD6O75340 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD6O75340 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD6O75340 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDCD6O75340 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD6O75340 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDCD6O75340 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.75■□□□□ 0.75
PDCD6O75340 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.75■□□□□ 0.75
PDCD6O75340 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.75■□□□□ 0.75
PDCD6O75340 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PDCD6O75340 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD6O75340 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.74■□□□□ 0.75
PDCD6O75340 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.74■□□□□ 0.75
PDCD6O75340 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD6O75340 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD6O75340 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.73■□□□□ 0.75
PDCD6O75340 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD6O75340 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.73■□□□□ 0.75
PDCD6O75340 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD6O75340 FOXO3B-201ENST00000395675 1928 ntBASIC19.73■□□□□ 0.75
PDCD6O75340 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.73■□□□□ 0.75
PDCD6O75340 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD6O75340 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD6O75340 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD6O75340 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD6O75340 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD6O75340 AC004812.2-201ENST00000611079 2094 ntBASIC19.72■□□□□ 0.75
PDCD6O75340 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.72■□□□□ 0.75
PDCD6O75340 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.72■□□□□ 0.75
PDCD6O75340 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.72■□□□□ 0.75
PDCD6O75340 AC026202.3-201ENST00000600805 1127 ntBASIC19.72■□□□□ 0.75
PDCD6O75340 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD6O75340 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.72■□□□□ 0.75
PDCD6O75340 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD6O75340 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD6O75340 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD6O75340 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD6O75340 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD6O75340 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PDCD6O75340 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD6O75340 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD6O75340 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD6O75340 HLA-L-211ENST00000482052 1765 ntBASIC19.7■□□□□ 0.74
PDCD6O75340 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD6O75340 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD6O75340 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD6O75340 GPX1-201ENST00000419349 1106 ntBASIC19.7■□□□□ 0.74
PDCD6O75340 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PDCD6O75340 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD6O75340 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.69■□□□□ 0.74
PDCD6O75340 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD6O75340 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.69■□□□□ 0.74
PDCD6O75340 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD6O75340 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD6O75340 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.69■□□□□ 0.74
PDCD6O75340 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDCD6O75340 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDCD6O75340 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD6O75340 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PDCD6O75340 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD6O75340 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.68■□□□□ 0.74
PDCD6O75340 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD6O75340 MIR4449-201ENST00000578365 66 ntBASIC19.68■□□□□ 0.74
PDCD6O75340 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD6O75340 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD6O75340 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PDCD6O75340 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD6O75340 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
PDCD6O75340 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD6O75340 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD6O75340 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms