Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GMDSO60547 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GMDSO60547 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GMDSO60547 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GMDSO60547 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GMDSO60547 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
GMDSO60547 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GMDSO60547 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GMDSO60547 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GMDSO60547 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GMDSO60547 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GMDSO60547 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GMDSO60547 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GMDSO60547 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
GMDSO60547 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.59■□□□□ 0.89
GMDSO60547 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GMDSO60547 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GMDSO60547 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GMDSO60547 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GMDSO60547 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GMDSO60547 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GMDSO60547 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GMDSO60547 AC026202.3-201ENST00000600805 1127 ntBASIC20.58■□□□□ 0.89
GMDSO60547 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
GMDSO60547 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GMDSO60547 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
GMDSO60547 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GMDSO60547 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMDSO60547 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMDSO60547 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GMDSO60547 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GMDSO60547 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GMDSO60547 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GMDSO60547 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.57■□□□□ 0.88
GMDSO60547 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GMDSO60547 AC097639.1-201ENST00000565519 1891 ntBASIC20.56■□□□□ 0.88
GMDSO60547 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
GMDSO60547 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.56■□□□□ 0.88
GMDSO60547 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GMDSO60547 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.56■□□□□ 0.88
GMDSO60547 RAP2CP1-202ENST00000605179 643 ntBASIC20.56■□□□□ 0.88
GMDSO60547 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.56■□□□□ 0.88
GMDSO60547 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
GMDSO60547 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.56■□□□□ 0.88
GMDSO60547 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GMDSO60547 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GMDSO60547 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GMDSO60547 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GMDSO60547 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GMDSO60547 LINC01124-201ENST00000409786 2117 ntBASIC20.55■□□□□ 0.88
GMDSO60547 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GMDSO60547 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMDSO60547 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMDSO60547 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GMDSO60547 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GMDSO60547 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GMDSO60547 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.54■□□□□ 0.88
GMDSO60547 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GMDSO60547 AC133552.2-201ENST00000619106 1032 ntBASIC20.54■□□□□ 0.88
GMDSO60547 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GMDSO60547 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
GMDSO60547 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.54■□□□□ 0.88
GMDSO60547 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 LINC00543-201ENST00000567234 1845 ntBASIC20.53■□□□□ 0.88
GMDSO60547 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.53■□□□□ 0.88
GMDSO60547 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.53■□□□□ 0.88
GMDSO60547 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GMDSO60547 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GMDSO60547 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.53■□□□□ 0.88
GMDSO60547 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.53■□□□□ 0.88
GMDSO60547 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.52■□□□□ 0.88
GMDSO60547 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GMDSO60547 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GMDSO60547 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GMDSO60547 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.52■□□□□ 0.88
GMDSO60547 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GMDSO60547 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GMDSO60547 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GMDSO60547 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
GMDSO60547 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
GMDSO60547 AC009831.1-201ENST00000580420 1582 ntBASIC20.51■□□□□ 0.87
GMDSO60547 AC079834.2-201ENST00000609776 1949 ntBASIC20.51■□□□□ 0.87
GMDSO60547 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.51■□□□□ 0.87
GMDSO60547 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.51■□□□□ 0.87
GMDSO60547 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GMDSO60547 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GMDSO60547 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GMDSO60547 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.5■□□□□ 0.87
GMDSO60547 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GMDSO60547 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GMDSO60547 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
GMDSO60547 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms