Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NPHS1O60500 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
NPHS1O60500 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
NPHS1O60500 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.92■■□□□ 1.26
NPHS1O60500 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.92■■□□□ 1.26
NPHS1O60500 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
NPHS1O60500 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.92■■□□□ 1.26
NPHS1O60500 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
NPHS1O60500 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
NPHS1O60500 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.91■■□□□ 1.26
NPHS1O60500 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.91■■□□□ 1.26
NPHS1O60500 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
NPHS1O60500 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
NPHS1O60500 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.91■■□□□ 1.26
NPHS1O60500 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NPHS1O60500 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
NPHS1O60500 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
NPHS1O60500 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NPHS1O60500 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.9■■□□□ 1.26
NPHS1O60500 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.9■■□□□ 1.26
NPHS1O60500 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NPHS1O60500 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.89■■□□□ 1.26
NPHS1O60500 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
NPHS1O60500 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.89■■□□□ 1.25
NPHS1O60500 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.89■■□□□ 1.25
NPHS1O60500 AC093536.1-201ENST00000569153 554 ntBASIC22.89■■□□□ 1.25
NPHS1O60500 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NPHS1O60500 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NPHS1O60500 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.88■■□□□ 1.25
NPHS1O60500 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.88■■□□□ 1.25
NPHS1O60500 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.88■■□□□ 1.25
NPHS1O60500 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
NPHS1O60500 HLA-L-211ENST00000482052 1765 ntBASIC22.88■■□□□ 1.25
NPHS1O60500 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NPHS1O60500 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
NPHS1O60500 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
NPHS1O60500 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NPHS1O60500 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NPHS1O60500 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.87■■□□□ 1.25
NPHS1O60500 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.87■■□□□ 1.25
NPHS1O60500 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NPHS1O60500 AC133561.1-201ENST00000568600 2415 ntBASIC22.87■■□□□ 1.25
NPHS1O60500 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
NPHS1O60500 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NPHS1O60500 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NPHS1O60500 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NPHS1O60500 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.86■■□□□ 1.25
NPHS1O60500 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NPHS1O60500 DUSP8P5-201ENST00000422884 1815 ntBASIC22.86■■□□□ 1.25
NPHS1O60500 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
NPHS1O60500 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NPHS1O60500 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NPHS1O60500 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NPHS1O60500 AC068473.5-201ENST00000616428 2072 ntBASIC22.85■■□□□ 1.25
NPHS1O60500 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.85■■□□□ 1.25
NPHS1O60500 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NPHS1O60500 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
NPHS1O60500 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
NPHS1O60500 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NPHS1O60500 ABCB10P4-201ENST00000566803 2184 ntBASIC22.84■■□□□ 1.25
NPHS1O60500 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.84■■□□□ 1.25
NPHS1O60500 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
NPHS1O60500 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
NPHS1O60500 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NPHS1O60500 KRT18P10-201ENST00000388836 1287 ntBASIC22.83■■□□□ 1.25
NPHS1O60500 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.83■■□□□ 1.25
NPHS1O60500 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.83■■□□□ 1.25
NPHS1O60500 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
NPHS1O60500 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
NPHS1O60500 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NPHS1O60500 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NPHS1O60500 FOXO3B-201ENST00000395675 1928 ntBASIC22.82■■□□□ 1.24
NPHS1O60500 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NPHS1O60500 MIR639-201ENST00000384974 98 ntBASIC22.82■■□□□ 1.24
NPHS1O60500 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NPHS1O60500 AC022413.1-201ENST00000624602 984 ntBASIC22.82■■□□□ 1.24
NPHS1O60500 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.82■■□□□ 1.24
NPHS1O60500 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
NPHS1O60500 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
NPHS1O60500 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
NPHS1O60500 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NPHS1O60500 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.82■■□□□ 1.24
NPHS1O60500 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NPHS1O60500 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NPHS1O60500 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.81■■□□□ 1.24
NPHS1O60500 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NPHS1O60500 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
NPHS1O60500 AC007029.1-201ENST00000604183 313 ntBASIC22.81■■□□□ 1.24
NPHS1O60500 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NPHS1O60500 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NPHS1O60500 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
NPHS1O60500 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.81■■□□□ 1.24
NPHS1O60500 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
NPHS1O60500 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NPHS1O60500 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NPHS1O60500 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.8■■□□□ 1.24
NPHS1O60500 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.8■■□□□ 1.24
NPHS1O60500 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
NPHS1O60500 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
NPHS1O60500 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms