Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ATP2A1O14983 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ATP2A1O14983 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.06■■□□□ 1.92
ATP2A1O14983 MTDHP2-201ENST00000601468 714 ntBASIC27.06■■□□□ 1.92
ATP2A1O14983 AC090877.2-201ENST00000558441 1738 ntBASIC27.06■■□□□ 1.92
ATP2A1O14983 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.06■■□□□ 1.92
ATP2A1O14983 AC010501.1-201ENST00000606270 1962 ntBASIC27.06■■□□□ 1.92
ATP2A1O14983 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ATP2A1O14983 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ATP2A1O14983 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ATP2A1O14983 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
ATP2A1O14983 MIR3621-201ENST00000580529 85 ntBASIC27.05■■□□□ 1.92
ATP2A1O14983 AL117332.1-201ENST00000622628 974 ntBASIC27.05■■□□□ 1.92
ATP2A1O14983 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.05■■□□□ 1.92
ATP2A1O14983 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ATP2A1O14983 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ATP2A1O14983 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.04■■□□□ 1.92
ATP2A1O14983 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.04■■□□□ 1.92
ATP2A1O14983 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
ATP2A1O14983 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ATP2A1O14983 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ATP2A1O14983 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.04■■□□□ 1.92
ATP2A1O14983 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.04■■□□□ 1.92
ATP2A1O14983 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
ATP2A1O14983 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
ATP2A1O14983 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.03■■□□□ 1.92
ATP2A1O14983 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.03■■□□□ 1.92
ATP2A1O14983 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ATP2A1O14983 AC131281.2-201ENST00000520478 145 ntBASIC27.03■■□□□ 1.92
ATP2A1O14983 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.03■■□□□ 1.92
ATP2A1O14983 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ATP2A1O14983 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
ATP2A1O14983 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.02■■□□□ 1.92
ATP2A1O14983 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ATP2A1O14983 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ATP2A1O14983 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ATP2A1O14983 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.02■■□□□ 1.92
ATP2A1O14983 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.02■■□□□ 1.92
ATP2A1O14983 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.02■■□□□ 1.92
ATP2A1O14983 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ATP2A1O14983 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ATP2A1O14983 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ATP2A1O14983 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ATP2A1O14983 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.01■■□□□ 1.91
ATP2A1O14983 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
ATP2A1O14983 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ATP2A1O14983 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.01■■□□□ 1.91
ATP2A1O14983 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.01■■□□□ 1.91
ATP2A1O14983 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ATP2A1O14983 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
ATP2A1O14983 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ATP2A1O14983 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27■■□□□ 1.91
ATP2A1O14983 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ATP2A1O14983 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ATP2A1O14983 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27■■□□□ 1.91
ATP2A1O14983 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ATP2A1O14983 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.99■■□□□ 1.91
ATP2A1O14983 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ATP2A1O14983 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ATP2A1O14983 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.99■■□□□ 1.91
ATP2A1O14983 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
ATP2A1O14983 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ATP2A1O14983 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.98■■□□□ 1.91
ATP2A1O14983 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
ATP2A1O14983 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ATP2A1O14983 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
ATP2A1O14983 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ATP2A1O14983 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ATP2A1O14983 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ATP2A1O14983 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.97■■□□□ 1.91
ATP2A1O14983 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ATP2A1O14983 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ATP2A1O14983 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.96■■□□□ 1.91
ATP2A1O14983 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.96■■□□□ 1.91
ATP2A1O14983 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ATP2A1O14983 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.96■■□□□ 1.91
ATP2A1O14983 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
ATP2A1O14983 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
ATP2A1O14983 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.95■■□□□ 1.9
ATP2A1O14983 AL356740.2-201ENST00000601559 647 ntBASIC26.95■■□□□ 1.9
ATP2A1O14983 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
ATP2A1O14983 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.94■■□□□ 1.9
ATP2A1O14983 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.94■■□□□ 1.9
ATP2A1O14983 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.94■■□□□ 1.9
ATP2A1O14983 SNX5-217ENST00000606557 1087 ntBASIC26.94■■□□□ 1.9
ATP2A1O14983 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
ATP2A1O14983 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
ATP2A1O14983 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.94■■□□□ 1.9
ATP2A1O14983 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.94■■□□□ 1.9
ATP2A1O14983 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATP2A1O14983 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ATP2A1O14983 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATP2A1O14983 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ATP2A1O14983 AL121749.1-202ENST00000609313 2153 ntBASIC26.93■■□□□ 1.9
ATP2A1O14983 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.93■■□□□ 1.9
ATP2A1O14983 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ATP2A1O14983 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
ATP2A1O14983 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.92■■□□□ 1.9
ATP2A1O14983 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
ATP2A1O14983 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms