Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC39■■■■□ 3.83
CHD1O14646 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
CHD1O14646 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC39■■■■□ 3.83
CHD1O14646 ASB1-202ENST00000409297 878 ntTSL 5 BASIC39■■■■□ 3.83
CHD1O14646 RHOF-204ENST00000537265 699 ntTSL 2 BASIC39■■■■□ 3.83
CHD1O14646 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC38.99■■■■□ 3.83
CHD1O14646 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC38.99■■■■□ 3.83
CHD1O14646 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
CHD1O14646 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC38.98■■■■□ 3.83
CHD1O14646 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
CHD1O14646 AC034268.1-201ENST00000441047 882 ntBASIC38.97■■■■□ 3.83
CHD1O14646 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC38.97■■■■□ 3.83
CHD1O14646 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
CHD1O14646 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
CHD1O14646 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC38.97■■■■□ 3.83
CHD1O14646 AL137784.2-201ENST00000607332 1000 ntBASIC38.97■■■■□ 3.83
CHD1O14646 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
CHD1O14646 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC38.96■■■■□ 3.83
CHD1O14646 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
CHD1O14646 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC38.95■■■■□ 3.83
CHD1O14646 DUX4L19-201ENST00000557448 1267 ntBASIC38.95■■■■□ 3.83
CHD1O14646 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC38.95■■■■□ 3.83
CHD1O14646 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
CHD1O14646 ID1-201ENST00000376105 1233 ntBASIC38.94■■■■□ 3.82
CHD1O14646 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC38.94■■■■□ 3.82
CHD1O14646 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC38.94■■■■□ 3.82
CHD1O14646 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
CHD1O14646 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC38.94■■■■□ 3.82
CHD1O14646 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC38.94■■■■□ 3.82
CHD1O14646 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
CHD1O14646 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC38.92■■■■□ 3.82
CHD1O14646 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
CHD1O14646 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC38.92■■■■□ 3.82
CHD1O14646 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC38.92■■■■□ 3.82
CHD1O14646 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
CHD1O14646 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC38.92■■■■□ 3.82
CHD1O14646 AC022517.1-201ENST00000592429 346 ntBASIC38.92■■■■□ 3.82
CHD1O14646 IRS3P-201ENST00000223076 1006 ntBASIC38.91■■■■□ 3.82
CHD1O14646 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC38.91■■■■□ 3.82
CHD1O14646 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
CHD1O14646 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC38.9■■■■□ 3.82
CHD1O14646 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
CHD1O14646 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
CHD1O14646 AC004448.1-201ENST00000458332 883 ntBASIC38.9■■■■□ 3.82
CHD1O14646 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC38.9■■■■□ 3.82
CHD1O14646 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
CHD1O14646 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC38.9■■■■□ 3.82
CHD1O14646 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC38.89■■■■□ 3.82
CHD1O14646 AL031602.1-201ENST00000633169 911 ntBASIC38.89■■■■□ 3.82
CHD1O14646 PROC-203ENST00000409048 1586 ntTSL 5 BASIC38.89■■■■□ 3.82
CHD1O14646 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC38.89■■■■□ 3.82
CHD1O14646 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
CHD1O14646 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC38.89■■■■□ 3.82
CHD1O14646 PTCHD3P2-201ENST00000424937 1205 ntBASIC38.89■■■■□ 3.82
CHD1O14646 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC38.88■■■■□ 3.82
CHD1O14646 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC38.88■■■■□ 3.81
CHD1O14646 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC38.88■■■■□ 3.81
CHD1O14646 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CHD1O14646 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CHD1O14646 SSSCA1-AS1-201ENST00000567594 614 ntBASIC38.87■■■■□ 3.81
CHD1O14646 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC38.87■■■■□ 3.81
CHD1O14646 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC38.87■■■■□ 3.81
CHD1O14646 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
CHD1O14646 SP2-202ENST00000613139 908 ntTSL 5 BASIC38.86■■■■□ 3.81
CHD1O14646 BX255925.1-201ENST00000566954 1854 ntBASIC38.86■■■■□ 3.81
CHD1O14646 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC38.86■■■■□ 3.81
CHD1O14646 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC38.86■■■■□ 3.81
CHD1O14646 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
CHD1O14646 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC38.85■■■■□ 3.81
CHD1O14646 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
CHD1O14646 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
CHD1O14646 SNAI3-AS1-204ENST00000567997 2048 ntBASIC38.85■■■■□ 3.81
CHD1O14646 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC38.84■■■■□ 3.81
CHD1O14646 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC38.84■■■■□ 3.81
CHD1O14646 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CHD1O14646 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CHD1O14646 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
CHD1O14646 AC099791.1-201ENST00000416440 715 ntBASIC38.83■■■■□ 3.81
CHD1O14646 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC38.83■■■■□ 3.81
CHD1O14646 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC38.83■■■■□ 3.81
CHD1O14646 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC38.83■■■■□ 3.81
CHD1O14646 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC38.82■■■■□ 3.81
CHD1O14646 SLC47A1P1-202ENST00000449666 945 ntBASIC38.82■■■■□ 3.8
CHD1O14646 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC38.82■■■■□ 3.8
CHD1O14646 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC38.82■■■■□ 3.8
CHD1O14646 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC38.81■■■■□ 3.8
CHD1O14646 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC38.81■■■■□ 3.8
CHD1O14646 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC38.81■■■■□ 3.8
CHD1O14646 SERBP1P1-201ENST00000396021 1160 ntBASIC38.81■■■■□ 3.8
CHD1O14646 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC38.81■■■■□ 3.8
CHD1O14646 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC38.81■■■■□ 3.8
CHD1O14646 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC38.81■■■■□ 3.8
CHD1O14646 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC38.8■■■■□ 3.8
CHD1O14646 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
CHD1O14646 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
CHD1O14646 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
CHD1O14646 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC38.8■■■■□ 3.8
CHD1O14646 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
CHD1O14646 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
CHD1O14646 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms