Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.59■■■□□ 2.65
RTL1A6NKG5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RTL1A6NKG5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.59■■■□□ 2.65
RTL1A6NKG5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RTL1A6NKG5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.59■■■□□ 2.65
RTL1A6NKG5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.58■■■□□ 2.65
RTL1A6NKG5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RTL1A6NKG5 AL512631.2-201ENST00000604634 923 ntBASIC31.58■■■□□ 2.65
RTL1A6NKG5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RTL1A6NKG5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
RTL1A6NKG5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
RTL1A6NKG5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.57■■■□□ 2.64
RTL1A6NKG5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.57■■■□□ 2.64
RTL1A6NKG5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RTL1A6NKG5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC31.57■■■□□ 2.64
RTL1A6NKG5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC31.57■■■□□ 2.64
RTL1A6NKG5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RTL1A6NKG5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RTL1A6NKG5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
RTL1A6NKG5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
RTL1A6NKG5 CD72-202ENST00000378430 585 ntTSL 3 BASIC31.56■■■□□ 2.64
RTL1A6NKG5 AL136116.3-201ENST00000402907 1138 ntBASIC31.56■■■□□ 2.64
RTL1A6NKG5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RTL1A6NKG5 SNX5-217ENST00000606557 1087 ntBASIC31.56■■■□□ 2.64
RTL1A6NKG5 AC090877.2-201ENST00000558441 1738 ntBASIC31.56■■■□□ 2.64
RTL1A6NKG5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
RTL1A6NKG5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RTL1A6NKG5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
RTL1A6NKG5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.55■■■□□ 2.64
RTL1A6NKG5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.55■■■□□ 2.64
RTL1A6NKG5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.55■■■□□ 2.64
RTL1A6NKG5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
RTL1A6NKG5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.54■■■□□ 2.64
RTL1A6NKG5 AL139246.5-201ENST00000606645 996 ntBASIC31.54■■■□□ 2.64
RTL1A6NKG5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC31.54■■■□□ 2.64
RTL1A6NKG5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RTL1A6NKG5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RTL1A6NKG5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RTL1A6NKG5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RTL1A6NKG5 AC097639.1-201ENST00000565519 1891 ntBASIC31.53■■■□□ 2.64
RTL1A6NKG5 AL356740.2-201ENST00000601559 647 ntBASIC31.53■■■□□ 2.64
RTL1A6NKG5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
RTL1A6NKG5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
RTL1A6NKG5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
RTL1A6NKG5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RTL1A6NKG5 MIR4466-201ENST00000606121 54 ntBASIC31.52■■■□□ 2.64
RTL1A6NKG5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.51■■■□□ 2.63
RTL1A6NKG5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RTL1A6NKG5 ERN1-208ENST00000606895 2068 ntBASIC31.51■■■□□ 2.63
RTL1A6NKG5 AC010501.1-201ENST00000606270 1962 ntBASIC31.51■■■□□ 2.63
RTL1A6NKG5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
RTL1A6NKG5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
RTL1A6NKG5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.49■■■□□ 2.63
RTL1A6NKG5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RTL1A6NKG5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RTL1A6NKG5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
RTL1A6NKG5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RTL1A6NKG5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC31.49■■■□□ 2.63
RTL1A6NKG5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
RTL1A6NKG5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.49■■■□□ 2.63
RTL1A6NKG5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.49■■■□□ 2.63
RTL1A6NKG5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RTL1A6NKG5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
RTL1A6NKG5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RTL1A6NKG5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.48■■■□□ 2.63
RTL1A6NKG5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.48■■■□□ 2.63
RTL1A6NKG5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RTL1A6NKG5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.48■■■□□ 2.63
RTL1A6NKG5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
RTL1A6NKG5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.47■■■□□ 2.63
RTL1A6NKG5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.47■■■□□ 2.63
RTL1A6NKG5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RTL1A6NKG5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.46■■■□□ 2.63
RTL1A6NKG5 AC110285.6-201ENST00000617652 491 ntBASIC31.46■■■□□ 2.63
RTL1A6NKG5 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.46■■■□□ 2.63
RTL1A6NKG5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RTL1A6NKG5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
RTL1A6NKG5 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.45■■■□□ 2.63
RTL1A6NKG5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC31.45■■■□□ 2.63
RTL1A6NKG5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.45■■■□□ 2.63
RTL1A6NKG5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
RTL1A6NKG5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.45■■■□□ 2.63
RTL1A6NKG5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RTL1A6NKG5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
RTL1A6NKG5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
RTL1A6NKG5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
RTL1A6NKG5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RTL1A6NKG5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC31.44■■■□□ 2.62
RTL1A6NKG5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC31.44■■■□□ 2.62
RTL1A6NKG5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
RTL1A6NKG5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
RTL1A6NKG5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.43■■■□□ 2.62
RTL1A6NKG5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.43■■■□□ 2.62
RTL1A6NKG5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.43■■■□□ 2.62
RTL1A6NKG5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.43■■■□□ 2.62
RTL1A6NKG5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RTL1A6NKG5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RTL1A6NKG5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RTL1A6NKG5 MIR6722-201ENST00000617286 78 ntBASIC31.43■■■□□ 2.62
RTL1A6NKG5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms