Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MSGN1A6NI15 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.41■□□□□ 0.7
MSGN1A6NI15 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MSGN1A6NI15 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MSGN1A6NI15 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MSGN1A6NI15 AL359504.2-201ENST00000605506 1601 ntBASIC19.4■□□□□ 0.7
MSGN1A6NI15 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.39■□□□□ 0.7
MSGN1A6NI15 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MSGN1A6NI15 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSGN1A6NI15 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.39■□□□□ 0.69
MSGN1A6NI15 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.39■□□□□ 0.69
MSGN1A6NI15 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSGN1A6NI15 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.39■□□□□ 0.69
MSGN1A6NI15 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MSGN1A6NI15 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MSGN1A6NI15 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSGN1A6NI15 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSGN1A6NI15 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MSGN1A6NI15 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.38■□□□□ 0.69
MSGN1A6NI15 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MSGN1A6NI15 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MSGN1A6NI15 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MSGN1A6NI15 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
MSGN1A6NI15 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.37■□□□□ 0.69
MSGN1A6NI15 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MSGN1A6NI15 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.37■□□□□ 0.69
MSGN1A6NI15 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.37■□□□□ 0.69
MSGN1A6NI15 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSGN1A6NI15 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MSGN1A6NI15 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSGN1A6NI15 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MSGN1A6NI15 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.36■□□□□ 0.69
MSGN1A6NI15 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSGN1A6NI15 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSGN1A6NI15 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MSGN1A6NI15 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MSGN1A6NI15 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.36■□□□□ 0.69
MSGN1A6NI15 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSGN1A6NI15 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MSGN1A6NI15 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.36■□□□□ 0.69
MSGN1A6NI15 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSGN1A6NI15 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.36■□□□□ 0.69
MSGN1A6NI15 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSGN1A6NI15 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MSGN1A6NI15 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MSGN1A6NI15 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.35■□□□□ 0.69
MSGN1A6NI15 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSGN1A6NI15 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MSGN1A6NI15 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.35■□□□□ 0.69
MSGN1A6NI15 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.35■□□□□ 0.69
MSGN1A6NI15 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSGN1A6NI15 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MSGN1A6NI15 AC141586.4-201ENST00000624558 1573 ntBASIC19.35■□□□□ 0.69
MSGN1A6NI15 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSGN1A6NI15 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.35■□□□□ 0.69
MSGN1A6NI15 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MSGN1A6NI15 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSGN1A6NI15 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSGN1A6NI15 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSGN1A6NI15 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSGN1A6NI15 AC004812.2-201ENST00000611079 2094 ntBASIC19.34■□□□□ 0.69
MSGN1A6NI15 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MSGN1A6NI15 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSGN1A6NI15 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSGN1A6NI15 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSGN1A6NI15 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSGN1A6NI15 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
MSGN1A6NI15 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.33■□□□□ 0.68
MSGN1A6NI15 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.33■□□□□ 0.68
MSGN1A6NI15 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSGN1A6NI15 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSGN1A6NI15 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSGN1A6NI15 SLC6A10P-202ENST00000431994 2058 ntBASIC19.32■□□□□ 0.68
MSGN1A6NI15 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSGN1A6NI15 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSGN1A6NI15 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSGN1A6NI15 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSGN1A6NI15 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MSGN1A6NI15 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSGN1A6NI15 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MSGN1A6NI15 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MSGN1A6NI15 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MSGN1A6NI15 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MSGN1A6NI15 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MSGN1A6NI15 ABCB10P4-201ENST00000566803 2184 ntBASIC19.31■□□□□ 0.68
MSGN1A6NI15 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MSGN1A6NI15 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MSGN1A6NI15 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSGN1A6NI15 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MSGN1A6NI15 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSGN1A6NI15 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms