Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RBFOX3A6NFN3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RBFOX3A6NFN3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RBFOX3A6NFN3 AC137767.1-201ENST00000602918 1920 ntBASIC18.47■□□□□ 0.55
RBFOX3A6NFN3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.47■□□□□ 0.55
RBFOX3A6NFN3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.47■□□□□ 0.55
RBFOX3A6NFN3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.47■□□□□ 0.55
RBFOX3A6NFN3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RBFOX3A6NFN3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.47■□□□□ 0.55
RBFOX3A6NFN3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RBFOX3A6NFN3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX3A6NFN3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RBFOX3A6NFN3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX3A6NFN3 C1orf229-201ENST00000623686 2258 ntBASIC18.46■□□□□ 0.55
RBFOX3A6NFN3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX3A6NFN3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX3A6NFN3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.46■□□□□ 0.55
RBFOX3A6NFN3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX3A6NFN3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.46■□□□□ 0.54
RBFOX3A6NFN3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.45■□□□□ 0.54
RBFOX3A6NFN3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX3A6NFN3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX3A6NFN3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX3A6NFN3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX3A6NFN3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX3A6NFN3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX3A6NFN3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.44■□□□□ 0.54
RBFOX3A6NFN3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.44■□□□□ 0.54
RBFOX3A6NFN3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.44■□□□□ 0.54
RBFOX3A6NFN3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 RARRES2P7-201ENST00000567349 469 ntBASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.43■□□□□ 0.54
RBFOX3A6NFN3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RBFOX3A6NFN3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.42■□□□□ 0.54
RBFOX3A6NFN3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RBFOX3A6NFN3 LINC00526-201ENST00000581067 1875 ntBASIC18.42■□□□□ 0.54
RBFOX3A6NFN3 SETD8P1-201ENST00000623146 1180 ntBASIC18.42■□□□□ 0.54
RBFOX3A6NFN3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RBFOX3A6NFN3 AC127496.7-201ENST00000625110 1798 ntBASIC18.42■□□□□ 0.54
RBFOX3A6NFN3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RBFOX3A6NFN3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RBFOX3A6NFN3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RBFOX3A6NFN3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RBFOX3A6NFN3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RBFOX3A6NFN3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RBFOX3A6NFN3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RBFOX3A6NFN3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RBFOX3A6NFN3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms