Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CCDC189A1A4V9 MIR4449-201ENST00000578365 66 ntBASIC23.35■■□□□ 1.33
CCDC189A1A4V9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CCDC189A1A4V9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC189A1A4V9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC189A1A4V9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 AL139125.2-201ENST00000623134 1869 ntBASIC23.34■■□□□ 1.33
CCDC189A1A4V9 SLC25A24-204ENST00000569674 2357 ntBASIC23.34■■□□□ 1.33
CCDC189A1A4V9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CCDC189A1A4V9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC189A1A4V9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC189A1A4V9 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC189A1A4V9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC189A1A4V9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC189A1A4V9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC189A1A4V9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC189A1A4V9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.33■■□□□ 1.32
CCDC189A1A4V9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCDC189A1A4V9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCDC189A1A4V9 SLC6A10P-202ENST00000431994 2058 ntBASIC23.32■■□□□ 1.32
CCDC189A1A4V9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.32■■□□□ 1.32
CCDC189A1A4V9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CCDC189A1A4V9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.32■■□□□ 1.32
CCDC189A1A4V9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC189A1A4V9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.32■■□□□ 1.32
CCDC189A1A4V9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.32■■□□□ 1.32
CCDC189A1A4V9 AC007029.1-201ENST00000604183 313 ntBASIC23.32■■□□□ 1.32
CCDC189A1A4V9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.31■■□□□ 1.32
CCDC189A1A4V9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CCDC189A1A4V9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC189A1A4V9 AC093536.1-201ENST00000569153 554 ntBASIC23.31■■□□□ 1.32
CCDC189A1A4V9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC189A1A4V9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC189A1A4V9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC189A1A4V9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC189A1A4V9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.31■■□□□ 1.32
CCDC189A1A4V9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC189A1A4V9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CCDC189A1A4V9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC189A1A4V9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC189A1A4V9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC189A1A4V9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.28■■□□□ 1.32
CCDC189A1A4V9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CCDC189A1A4V9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC189A1A4V9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC189A1A4V9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 AL121603.2-201ENST00000557373 2117 ntBASIC23.27■■□□□ 1.32
CCDC189A1A4V9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 RAP2CP1-202ENST00000605179 643 ntBASIC23.27■■□□□ 1.32
CCDC189A1A4V9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC189A1A4V9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC189A1A4V9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CCDC189A1A4V9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC189A1A4V9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC189A1A4V9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
CCDC189A1A4V9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms